Gene Aazo_1184 details

Gene Information

• Locus tag: Aazo_1184
• ID: 9338979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 1266812
• End bp: 1267576
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 41%
• Product: pseudouridine synthase
• Protein accession: YP_003720628
• Protein GI: 298490451

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGCAC GGATACAGAA AATAATTTCT CAATGGGGTA TTGCCTCACG TCGTGAAGCT 
GAAGAGATGA TTAAGCGCTC GCGAGTGAAG ATAAATGGGA TTTTGGCACA TTTAGGTCAA 
AAAGTCGATC CCCAAATAGA CACAATTTCT ATTGATGGTC AACCTATCTC TCAAAGCCAG 
CATCCGTCTT TAATTTATTT GTTACTAAAT AAACCACCCG GAGTTGTTTC GACCTGTGAC 
GATCCCCAAG GCAGACCTAC GGTTCTAGAT TTATTACCAC AAAAATTGCG ACATGGTTTA 
GGTATTCACC CAGTTGGACG CTTGGATGCA GACTCTACAG GGGCATTAAT ATTAACAAAT 
GATGGGGACT TGACATTTTC GCTAACTCAT CCTAGTCATA ATATTGCTAA GACATATCAT 
ATTGTCGTTA AAGGACATCC CCCAGAAGTA GTTCTAGGGA GGTGGCGTGA AGGTGTATTT 
CTGGAAGGAA GAAAAACACG ACCAGCTAAA GTGCAATTAA TTGAATCTTT GGCTCACCAA 
AGCAAATTAG AAATTATTTT GCAAGAGGGA AGAAATCGCC AGATTCGTCG TGTCGCTGAA 
CAGTTAGGAT ATCCAGTTAT CCAACTGCAT CGCACAGCCA TAGGTTCAAT TCAATTACAA 
ACCCCAAAAG CTCGATTTCT CCTCTGGGGT GACTATCGTC ATATTACCCC AGAGGAGATA 
ATTGTTTTAA AAAAGCAGAT AAAGCGGATA CCTATTAACG ATTAA 

 

Protein sequence

MEARIQKIIS QWGIASRREA EEMIKRSRVK INGILAHLGQ KVDPQIDTIS IDGQPISQSQ 
HPSLIYLLLN KPPGVVSTCD DPQGRPTVLD LLPQKLRHGL GIHPVGRLDA DSTGALILTN 
DGDLTFSLTH PSHNIAKTYH IVVKGHPPEV VLGRWREGVF LEGRKTRPAK VQLIESLAHQ 
SKLEIILQEG RNRQIRRVAE QLGYPVIQLH RTAIGSIQLQ TPKARFLLWG DYRHITPEEI 
IVLKKQIKRI PIND