| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aazo_1059 |
|---|
| Symbol | |
|---|
| ID | 9338855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | 'Nostoc azollae' 0708 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014248 |
|---|
| Strand | + |
|---|
| Start bp | 1131903 |
|---|
| End bp | 1132958 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | photosystem II D2 protein |
|---|
| Protein accession | YP_003720539 |
|---|
| Protein GI | 298490362 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00303262 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG CAGTTGGACG CGCCCAGTCA AGAGGGTGGT TTGACGTACT AGACGACTGG
TTGAAGCGCG ATCGCTTCGT ATTCGTAGGT TGGTCAGGAA TATTACTATT CCCCTGCGCC
TTCCTAGCAC TAGGTGGCTG GCTAACCGGT ACAACCTTCG TCACCTCCTG GTACACCCAC
GGATTAGCAT CCTCCTATCT AGAAGGAGCA AACTTCCTCA CAGTAGCAGT ATCCACACCC
GCAGACAGCA TGGGACACTC CCTACTGTTA CTCTGGGGAC CTGAAGCTCA AGGTAACTTA
ACTCGTTGGT TTCAACTAGG TGGCCTATGG CCATTCGTTG CTCTACACGG AGCATTCGGA
CTAATCGGCT TCATGTTGCG CCAATTTGAA ATTGCCAGAC TAGTAGGGAT TCGTCCTTAC
AACGCTCTCG CCTTCTCAGG CCCCATCGCC GTATTCGTCA GCGTCTTCTT GATGTATCCC
TTGGGACAAT CTAGCTGGTT CTTTGCACCC AGCTTTGGTG TAGCAGCAAT CTTCCGATTC
TTGTTATTCC TACAAGGTTT CCACAACTGG ACACTCAACC CCTTCCACAT GATGGGTGTA
GCCGGAATAT TAGGTGGTGC ATTGCTATCT GCCATTCATG GTGCAACAGT AGAAAACACC
CTGTTTGAAG ATGGCGAAGG CTCCAATACC TTCCCCGGAT TTAATCCCAC CCAGGCGGAA
GAAACCTACT CCATGGTGAC AGCAAACCGA TTCTGGTCAC AGATTTTCGG GATTGCTTTC
TCTAACAAAC GTTGGTTACA CTTCTTCATG TTGTTTGTCC CAGTCACAGG CTTGTGGATG
AGTGCAGTAG GAATTGTGGG TTTAGCATTA AACCTACGGG CTTATGACTT CGTTTCCCAA
GAATTACGGG CAGCAGAAGA CCCAGAGTTT GAAACTTTCT ATACCAAAAA TATTTTGCTG
AACGAGGGTA TCCGCGCTTG GATGGCTCCT CAAGATCAAC CCCACGAACA ATTTGTATTC
CCTGAGGAGG TATTACCTCG TGGTAACGCT CTCTAA
|
|---|
| Protein sequence | MTIAVGRAQS RGWFDVLDDW LKRDRFVFVG WSGILLFPCA FLALGGWLTG TTFVTSWYTH
GLASSYLEGA NFLTVAVSTP ADSMGHSLLL LWGPEAQGNL TRWFQLGGLW PFVALHGAFG
LIGFMLRQFE IARLVGIRPY NALAFSGPIA VFVSVFLMYP LGQSSWFFAP SFGVAAIFRF
LLFLQGFHNW TLNPFHMMGV AGILGGALLS AIHGATVENT LFEDGEGSNT FPGFNPTQAE
ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVTGLWM SAVGIVGLAL NLRAYDFVSQ
ELRAAEDPEF ETFYTKNILL NEGIRAWMAP QDQPHEQFVF PEEVLPRGNA L
|
|---|
| |