Gene Aazo_0828 details

Gene Information

• Locus tag: Aazo_0828
• ID: 9338616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 875998
• End bp: 878178
• Gene Length: 2181 bp
• Protein Length: 726 aa
• Translation table: 11
• GC content: 40%
• Product: lipopolysaccharide biosynthesis protein
• Protein accession: YP_003720374
• Protein GI: 298490197

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.490846
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACCAA GAATTGTTAA GAAATATATT ATTGCTTTTG AAAAGTATAA ATGGATTGGA 
TTAGCCAGTT TTGGTTTAGT AGTAGCTGGG ACAATAGTGG TGGCTATACA ACCAGAACCA 
CCAGTTACCT ACCTAATAGA AGCTGCGGTG TCCTATACTG GACCACCAGT TTCTTTCTCA 
AAAACAGCCA GTGAAATTCA GGAACAGGGT AAAGAATTGA CACAAGAGGT ATTACTCTCA 
GATCAAATTG TTCTCAAGGT AGCGGATAAA GTAAAAGTAA AACCAAAAAC GATTGCTACC 
AATGTGAAAT TAAAGATGCC AGAAAAAACG AAATCTGGAG CATTAGAAAG TCCATTAATA 
ATAGTTTATT ATACAGATAT TGATGTTAAT AGAGGTGTAG ATGTATTAAC AGAATTGACA 
AAATTAATGG TGCAGTTAAG TGGTGATATT AACACTGGCA GACTGAAAAC AATTATAAAA 
AAAATTAATG AGCTTTTGCC ACAGGCCAAG AAAGAACTCC AAGCTGCTGA AAATAAACTG 
GAAGAATATG ATCGTCGGGA ACGTCCGGCA CTTGTGGAAG CAGAAAATGG TAGTTTGCTC 
GGTGGGATTA GTAATAGCAA AATTCAACAA AGAGAAATTA AATTCACTAT TGCTGGACTT 
GATGCTCAAC TTCGTTCTTT AGAAAAGAAG TTGGGTTTAA CAGTTCGTCA GGCTTATATT 
TCTTCAGCGT TGAGTGCTGA TACTATTATT GCCAATTTGC GATCACAAAT TTATCAAGTG 
GAGTCACAAA TTGCCGTTAT CAGAAGAGAT TTGCGCCCTG AACATCCGAC TATGATTCAA 
TTACAGCGCC AAAAAGGGGC TGCTGAAGAA TTGCTGCAAC AACGTGTGGA TGAGGTTTTA 
GGTGGTGGTG GGATGGCTGC TCCTATACGA GGTAATCTTA CAGGTATTCG CACTCAAAGT 
AGTTTAGATC TGACACGACA GGCGTTAGCA AATCAAATGG TGGCGTTGCA AACCCAGCGT 
GAAACCCTGG AACAACAACT AAAACAGCAA ATTCAACAGG AGGAGGAATT ACGGCGAGAA 
TCTGCTCTCA TCCCCAATAA ACAGTTAGAG CGCTCGCGTT TGGAACAAGC TGTAGGCTTT 
AAAAAAGCTA TATATGACCA AATGCAAGCC AAGCTAACTG ATGCAAAAGC CGCAGAAGCA 
GAAACTGTCA CTAGTCTCAG CTTAACCAAA CCACCAACAC CATTACCTGT AGTTGCTAAA 
CCCAAGAGTG TACCTGCTAC CTTGGCTATT GGTGCTTTAT TGGGTGCTGT GATTGGTGGT 
GGTGTCATAT TTTTGCTGGG GTCACTGGAA GGAACTTTCA AAACGAGAGA AGATATCCGG 
GAAAGCCTCA AGCAACGGGA TGTGTTACTA CTGGGAGAAT TGCCTTTAAT CTCAGTTGAT 
GATTTACCTC CAGAAGCCTT GCCAGTCATA CTTTCCTCTC ATTCTCCTTA TTTGGAGTTT 
TATGAGAAGT TCCGCAGTAA TTTACGTCGG ATTGGTGGTA AAGACGCAAA GGTGATATTA 
ATTACCAGCG TTAGTAGTCA AGAAGGTAAA ACATTGAGTG CTTATAACCT GGGGATAGCT 
TCAGCAAGGG CTGGGAAAAG AACCTTGATT ATCGAAACAG ATTTGCGATC GCCTTCCCGT 
GCTTCATCTC TAAATGTTGC CTCCTATGCT ACTCTTGAAC CACTGCTCTA TTATTCCAGC 
TTAAGTGACT GTATTCGCTT AGTTCCCGAA ATAGAAAATT TATACATTAT TCCTAGCGCC 
GGACCTGCAC TTCAATCTGC CGCAATTATC GAATCCAGCG AAATGGTCCG CGTGATAGAA 
GATGCTCGTC AGCGTTATGA TTTAGTGATT TTAGATACTA ATGATCTCAG CACTTCCAAT 
GATGCATTAT TAATGCAACC CTATAGTGAT GGTATAGTGC TGGTAGCGCG ACCTAATTAT 
ACACAAGAAA ATATGCTCAC TGAAGCTATT GATCAATTAG TAGAAGGTGA GTTAGGGCTA 
TTAGGAGCAA TTATTAATGC TGCTGATATC AGAGTTTCCA TACCTCAACC AGCAGAAGAA 
TTACCTACAT CCATACCTGA TCTCAATCTA GAAGCGATTA GGCAAACAGA AGATATATCC 
ACTATTTTCG GTAAAAATTA G 

 

Protein sequence

MTPRIVKKYI IAFEKYKWIG LASFGLVVAG TIVVAIQPEP PVTYLIEAAV SYTGPPVSFS 
KTASEIQEQG KELTQEVLLS DQIVLKVADK VKVKPKTIAT NVKLKMPEKT KSGALESPLI 
IVYYTDIDVN RGVDVLTELT KLMVQLSGDI NTGRLKTIIK KINELLPQAK KELQAAENKL 
EEYDRRERPA LVEAENGSLL GGISNSKIQQ REIKFTIAGL DAQLRSLEKK LGLTVRQAYI 
SSALSADTII ANLRSQIYQV ESQIAVIRRD LRPEHPTMIQ LQRQKGAAEE LLQQRVDEVL 
GGGGMAAPIR GNLTGIRTQS SLDLTRQALA NQMVALQTQR ETLEQQLKQQ IQQEEELRRE 
SALIPNKQLE RSRLEQAVGF KKAIYDQMQA KLTDAKAAEA ETVTSLSLTK PPTPLPVVAK 
PKSVPATLAI GALLGAVIGG GVIFLLGSLE GTFKTREDIR ESLKQRDVLL LGELPLISVD 
DLPPEALPVI LSSHSPYLEF YEKFRSNLRR IGGKDAKVIL ITSVSSQEGK TLSAYNLGIA 
SARAGKRTLI IETDLRSPSR ASSLNVASYA TLEPLLYYSS LSDCIRLVPE IENLYIIPSA 
GPALQSAAII ESSEMVRVIE DARQRYDLVI LDTNDLSTSN DALLMQPYSD GIVLVARPNY 
TQENMLTEAI DQLVEGELGL LGAIINAADI RVSIPQPAEE LPTSIPDLNL EAIRQTEDIS 
TIFGKN