Gene CA2559_13243 details

Gene Information

• Locus tag: CA2559_13243
• ID: 9298139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2870527
• End bp: 2871261
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 33%
• Product: pseudouridine synthase, Rsu
• Protein accession: YP_003717390
• Protein GI: 298209211

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCAA TTAGAATTAA TAAATACTTT ACAACAATTG GCTTTTGCTC TCGCAGAAAA 
GCAGATAAGC TTATTGAAGC TGGTTACGTA ACCGTAAACG GTAAACGCCC AGAAATGGGT 
CAAAAAATAG ATCCTGCAAA AGATAAAGTA CGCGTTAATG GAAAGCTTGT TGGACAAGAA 
GAAGAAAAAC CTGTGTACTT AGTTTTTAAT AAACCCGTTG GTATTGTTTG TACCACAGAT 
ACACACGTAG AGAAAGATAA TATTATAGAT TACATTAATT ATCCTAGCCG TATATTCCCA 
ATAGGACGAT TAGACAAACC TAGTGAAGGT CTTATTTTCT TAACCAATGA TGGAGATATT 
GTAAACAAAA TATTAAGAGC AAGAAACCAC CACGAAAAAG AATACATTGT TACTGTAGAT 
CGTGTTATTT CTGATGATTT TGTAAATAGA ATGAAATCTG GAATTCCTAT TTTAGATACT 
GTAACACGTG AATGCGAAGT AGAAAAAATT ACTGATTATA TGTTTAAAAT TGTGTTGACT 
CAAGGTCTTA ACAGACAAAT TAGACGTATG TGTGAGTATT TGGGTTACGA GGTACTAACC 
CTTAAACGTA TTAGAATTAT GAATGTAACT CTAGATATTC CAGTTGGAGA ATATAGAGAT 
TTTACAGATC AAGAATTTAA AGAGCTGCAA GATTTATTAG AAGACTCAGA GAAAACCGCT 
CCAGAAAATA ACTAA 

 

Protein sequence

MEPIRINKYF TTIGFCSRRK ADKLIEAGYV TVNGKRPEMG QKIDPAKDKV RVNGKLVGQE 
EEKPVYLVFN KPVGIVCTTD THVEKDNIID YINYPSRIFP IGRLDKPSEG LIFLTNDGDI 
VNKILRARNH HEKEYIVTVD RVISDDFVNR MKSGIPILDT VTRECEVEKI TDYMFKIVLT 
QGLNRQIRRM CEYLGYEVLT LKRIRIMNVT LDIPVGEYRD FTDQEFKELQ DLLEDSEKTA 
PENN