Gene CA2559_12808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12808 
Symbol 
ID9298052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2776458 
End bp2777870 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content34% 
IMG OID 
ProductDNA recombination protein RmuC 
Protein accessionYP_003717303 
Protein GI298209124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATC AAAACAATTC ATCATTAATT CAAATTAAGT CTGTAATTTA CTTGCTAACT 
TTACACAAAA CACAAGTTAT ATTTATAATG GATCAAAACT TTTTTGTATT TCTCTTAGTC
GGATTAATTT CTGCACTTTC TGGAGCGTAT TTGGGTAATC TTTTTGCGCG CTTAAAAAAT
AAGTCTGAAA CTAGCGCTTT ACAGGAACGC ATAAACCAAA CAGAACACCA ATTAGAACGT
GTTGAGGAAA GTTTAGGGCG TACAGAAGTT GAAAAGCAAA CAATACGTTC TGAAAAAGAA
CAACTTAATG CTACTATGCA GGTAATGAAA GTTGAGTATG ATGCTCTTGA ACGTAAAACC
AAAGAGCAAA AAGGTGAGAT GGAGCAACTT CAAGAAAAAT TCACCAAAGA ATTTGAAAAT
CTTGCCAATA AAATACTAGA TGAGAAATCG ACAAAATTCA CCGAGCAAAA CAAAACCAAT
ATAGATATCA TCTTAAAACC GCTTCAGGAA AAAATTGAAA AATTTGAAAA GCGTGTAGAA
GACAGTAACA AAGAACAGTA CGGAAGACAT AGCGAACTAA AGGAACAAAT TAAAGGCCTG
TCTGAACTTA ATCAACAAAT GAGTAAAGAT GCAGACAATC TTACAAAAGC ACTTAAGGGT
GATAGTAAAA TTCAAGGTAA TTGGGGAGAA TTAATTCTTA CCCGTATTTT AGAAAAATCT
GGTCTCGAAA AAGATAGAGA ATATACAGTA CAAGATAGTC ATGACAACCC TGAAGGCAGA
CGATTACAAA CTGACGTGCT AATACATTTA CCAGATGGTA AAAAAATGAT TATTGACAGC
AAGGTATCCT TAACAGACTT TGAACGCTTT GTTTCCTCTG AAGATGAAGA TGATAAACGC
AGGCATTTAA AATCACATAT AGCTTCAATT AAACGTCATG TTGAACAATT AAGTGCTAAA
AATTACCAAT ACCTTATAGA TGAAAGCCCG GACACTATAT TTATGTTTAT TCCTATTGAG
CCTGCATTTG CAATAGCATC TGCAAATGAG CCTAATTTGT ATGAAATTGC TTTTGATAAG
CAGGTTATAA TTGTAACACC TTCAACATTA TTAGCTGCAT TAAGATTGGT TGATAACCTA
TGGCAAAATG ATAGGCAAAA ACAAAATGCT ATTGAAATTG CAACACAAGC TGGTGCTCTA
TATGATAGTT TTACAAACTT GACAGATGAA TTAATTAAGG TAGGAAAGCA AATTGGTACA
GTACAGAACA GCTATGAAGG TGCAATGAAA AAACTTACCG GAAGAGGTAA TTTAATTAAG
CGTGTTGAAA AGCTGAAAAA ATTAGGCGCT AAAGCAAGCA AAGCTATTGA TGCCAAATTA
TTGAGCAGAG CAGAAGACAG TGACGAGGAT TAA
 
Protein sequence
MKHQNNSSLI QIKSVIYLLT LHKTQVIFIM DQNFFVFLLV GLISALSGAY LGNLFARLKN 
KSETSALQER INQTEHQLER VEESLGRTEV EKQTIRSEKE QLNATMQVMK VEYDALERKT
KEQKGEMEQL QEKFTKEFEN LANKILDEKS TKFTEQNKTN IDIILKPLQE KIEKFEKRVE
DSNKEQYGRH SELKEQIKGL SELNQQMSKD ADNLTKALKG DSKIQGNWGE LILTRILEKS
GLEKDREYTV QDSHDNPEGR RLQTDVLIHL PDGKKMIIDS KVSLTDFERF VSSEDEDDKR
RHLKSHIASI KRHVEQLSAK NYQYLIDESP DTIFMFIPIE PAFAIASANE PNLYEIAFDK
QVIIVTPSTL LAALRLVDNL WQNDRQKQNA IEIATQAGAL YDSFTNLTDE LIKVGKQIGT
VQNSYEGAMK KLTGRGNLIK RVEKLKKLGA KASKAIDAKL LSRAEDSDED