Gene CA2559_12308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12308 
Symbol 
ID9297951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2670757 
End bp2672355 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content35% 
IMG OID 
Productmalate synthase 
Protein accessionYP_003717203 
Protein GI298209024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACA CGCTTTTAAA ATTACCAAAA ATCACATACT CCAAAGATGT CAATAATTAT 
TATCCAGAAA TTTTAACTGA TGAAGCTCAT GATTTTTTGG CTGCACTTCA TGAAAAATTT
AATGGAGAGC GATTAAAATT GTTAAATAGA CGTTTACAAC AGCAAAGTGT ATTTGACAAC
GGGCAATTTC CAGAATTTCC TAAAGAAACG AAAGAGATTA GAAATACCGA CTGGACAGCA
GGTAGCATTC CGGGCGACTT ACAGGATAGA CGCGTAGAGA TTACTGGTCC TGTCGATAGA
AAAATGATTA TTAATGCTTT AAATTCTGGT GCCAAAACGT TTATGGCTGA CCTAGAAGAC
AGCAATGCCC CTACTTGGAG AAACAGCATT CAAGGACAGC AAAACTTAAT GGATGCTAAT
AAGAAAACAA TTAAATTAGT TGACACAAAA CGTGGGAAAT CTTACAAATT AAATAATAAA
ACAGCTGTTC TTCTAGTAAG ACCAAGAGGC TTACATTTAA ACGAAAAGAA CATATTAATA
AATAATGAAG AAGCTTCAGG AAGTTTAGTA GATTTTGGGT TATACGTATT TCACAACACA
AAAACATTGT TAGAAAATGG TACAGCTCCT TACTTTTATC TACCAAAATT AGAGCATTAT
TTAGAAGCAC GCTGGTGGAA TGAAGTTTTC ACTTTCGCTC AAGACTATTT AAAAGTTCCA
AAACGAACTT TTAAAGCAAC CGTTTTAGTA GAAACAATTA CTGCAAGTTT TCAATTAGAT
GAAATAATTT ACGAGCTTAA AGACCATATT GTTGGTTTAA ATTGTGGTCG TTGGGATTAC
ATTTTCTCAT ACATCAAGAA ATTCAGAAAT CACCCAAATT TTGTAGTCCC TAATCGTGAC
CAGGTAACTA TGACGACACC ATTTATGGAT GCTTATTCAA AATTAGTGAT CCAGCGTTGT
CATAAACGTG GCATACTTGC CATTGGTGGT ATGGCAGCGC AAATTCCTAT TAAAAACAAT
CCAGAAGCCA ACGCGGTTGC GCTAGAAAAA GTTAGAAAAG ATAAAGAACG TGAAGTAAAG
AACGGTCACG ATGGTACTTG GGTTGCGCAT CCTGCTTTAG TTGAAATAGC AATGACAGAA
TTTAACAAGT TTATGCCAAC ACCAAACCAG TTACACGTAA CACGTAACGA TATACACATC
ACCGAAGAAG ATTTAGTAGA AATTCCAAAA GGTACTGTGA CAGAAGCAGG AATTAGAAAA
AACATTAACG TAGGTATTTT ATATACAGAA GCTTGGCTAA GAGGACATGG AGCTGTAGCA
CTATACAATT TAATGGAAGA TGCTGCTACT GCCGAAATTT CTAGAACACA AGTTTGGCAA
TGGTTAAAAA ATGAAGTCAT ACTTGAAGAT GACAGAAAAT TTGACCTTAC ACTCTACAAA
GCGTTGTTTA ATGATGAAGT TGAAAAAATA ATAAAAGAGT ATGGCGAGTC TAACATTAAA
AATACCAAGT TTGAACTGGC GTTTGAGCTA TTTGATAAAA TAGTATTGTC AGAAAAATTT
GAAGAATTTT TAACGCTTTC AGCTTATCAA TATCTGTAA
 
Protein sequence
MEHTLLKLPK ITYSKDVNNY YPEILTDEAH DFLAALHEKF NGERLKLLNR RLQQQSVFDN 
GQFPEFPKET KEIRNTDWTA GSIPGDLQDR RVEITGPVDR KMIINALNSG AKTFMADLED
SNAPTWRNSI QGQQNLMDAN KKTIKLVDTK RGKSYKLNNK TAVLLVRPRG LHLNEKNILI
NNEEASGSLV DFGLYVFHNT KTLLENGTAP YFYLPKLEHY LEARWWNEVF TFAQDYLKVP
KRTFKATVLV ETITASFQLD EIIYELKDHI VGLNCGRWDY IFSYIKKFRN HPNFVVPNRD
QVTMTTPFMD AYSKLVIQRC HKRGILAIGG MAAQIPIKNN PEANAVALEK VRKDKEREVK
NGHDGTWVAH PALVEIAMTE FNKFMPTPNQ LHVTRNDIHI TEEDLVEIPK GTVTEAGIRK
NINVGILYTE AWLRGHGAVA LYNLMEDAAT AEISRTQVWQ WLKNEVILED DRKFDLTLYK
ALFNDEVEKI IKEYGESNIK NTKFELAFEL FDKIVLSEKF EEFLTLSAYQ YL