Gene CA2559_12208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12208 
Symbol 
ID9297931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand+ 
Start bp2648972 
End bp2649502 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content34% 
IMG OID 
Productputative RNA polymerase sigma factor 
Protein accessionYP_003717183 
Protein GI298209004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.812607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCAG ACAGTTTAAT TCTTCAAATG CAACGTAGAG ACGAAAAAGC ATTTGAAAGA 
CTTTACGAAC TATACTCCGA AAGCACATTT GGTATTATTT ATAACGTGGT ACAAGACACA 
GCAATTGCAG AAGAAGTTTT GCAAGATGTC TTTATTAAGA TATGGGACAA TGCCAATTCT 
TATTCTTCAA CTAAAGGTCG ATTTTTTACT TGGGTTCTTA ACATTGCTCG CAATGCAGCT 
ATAGATAAGA TTAGATCTAA AGACTTTAAG AACAAAAAGA AAAACCTAAA GGCAGAGTTT 
TTCGTAAATA TTCTTGAAGA TCAGAATAGT TTCTCTAAAC GTACAGACAC TATCGGAATC 
AGAAAATTTG TAAACGCTCT TGAGCCACTT TGCAAAAAAG TTATTGAAAT TTTATACTTC 
AAAGGGTTTA CACAAAAAGA TGCCGCAGTC GAGTTAGATA TGCCACTTGG TACTGTAAAA 
ACCAGAAATA GGATTTGTAT TAACAGGTTG AGGGAATTAA TGACTGAATA G
 
Protein sequence
MQPDSLILQM QRRDEKAFER LYELYSESTF GIIYNVVQDT AIAEEVLQDV FIKIWDNANS 
YSSTKGRFFT WVLNIARNAA IDKIRSKDFK NKKKNLKAEF FVNILEDQNS FSKRTDTIGI 
RKFVNALEPL CKKVIEILYF KGFTQKDAAV ELDMPLGTVK TRNRICINRL RELMTE