| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_12148 |
|---|
| Symbol | |
|---|
| ID | 9297919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2636828 |
|---|
| End bp | 2637475 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | NADH-ubiquinone oxidoreductase |
|---|
| Protein accession | YP_003717171 |
|---|
| Protein GI | 298208992 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTC TTTCAAAAAA AGATAGGGGT TTAATTTTAG ACCCATTAGC AGATGATAAC
CCAATTACAA TACAAGTTCT TGGTATCTGT TCTGCATTAG CAATTACAGC TCAGTTAAAA
CCATCTATTG TAATGGCTAT TTCGGTAGTC TTTGTATTAG GTGTGGGTAA TGTTGTAATC
TCATTAATGC GTAATATAAT TCCTTCTAAA ATTAGAATTA TAGTACAACT TATAGTAGTA
GCAACATTAG TAATTATTGT AGATCAGGTC CTAAAAGCCT TTGCTTACGA ATTAAGTAAA
GAGCTATCAG TATTTATCGG TCTTATAATT ACTAACTGTA TTATTATGGG ACGTTTTGAA
GCTTTTGCTT TAGGTAATGG CCCTTGGAGA TCTTTCTTAG ATGGTATAGG AAACGCTGCA
GGTTACGGTT TAATATTAAT TATAGTAGGT TTCTTTAGAG AGCTTTTAGG TTCTGGAACT
CTATTCGGAT TTAAAGTTCT TGGTGATTCT GTTGAGAAAA CAGGACTTTA TGCTATTGGT
TATGAAAATA ACGGTTTTAT GGTATTGCCT CCTATGGCAC TTATCGTAGT TGGAATCATT
ATATGGGTAC AACGTAGTAA GAACAAAGCA TTAATAGAGG AAAACTAA
|
|---|
| Protein sequence | MALLSKKDRG LILDPLADDN PITIQVLGIC SALAITAQLK PSIVMAISVV FVLGVGNVVI
SLMRNIIPSK IRIIVQLIVV ATLVIIVDQV LKAFAYELSK ELSVFIGLII TNCIIMGRFE
AFALGNGPWR SFLDGIGNAA GYGLILIIVG FFRELLGSGT LFGFKVLGDS VEKTGLYAIG
YENNGFMVLP PMALIVVGII IWVQRSKNKA LIEEN
|
|---|
| |