Gene CA2559_12123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12123 
Symbol 
ID9297914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2632665 
End bp2633669 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content31% 
IMG OID 
Productthiamine biosynthesis lipoprotein ApbE precursor 
Protein accessionYP_003717166 
Protein GI298208987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000732987 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT GTTTATTCTT ATTAGTTATA TTTTTTATTT GGTCTTGTAA TAATAATGAT 
CAAAATGAGA AACGTATTAG TGGTAACGCT TTAGGTACTA CCTATCAAAT AATCTATTTT
GATAATTTAG ATGAAGAAGT GTTTACAAAA GACATGGATT CTCTATTATA TGCTGTTAAC
TCATCACTAA GCACATACCA ATCAGATTCT GATATTTCAA AATTAAATGC TGGAGACACT
ACTATTGTTA TTGATGATAT GTTTACTGAA GTATTTCAAC TTTCTAAGAA AATACATAAA
GAAAGTTCAG GTTATTTTGA TCCTACAGTT GGTAACCTAG TAAATGCTTA CGGGTTTGGT
TCTAAGAAAT TTACAACAGT TGTAGATAGT ACTGTAATTG ATTCCCTAAC TACCTATGTA
GGATTAGATA AAGTAGTACT TAACAAAAAT AGAACCATAT CTAAAAAACA TCCAGAAGTT
TACTTAGAGT TTAACTCCAT AGCAAAAGGC TATTGTTTAG ATAGAATTTC AACTTATCTA
AAAGAAAAAG ATATTTCTAA TTTCTTAATT GAATTAGGAG GAGAACTAGT AGCAAGTGGA
AGTAAGCAAC CTGAAAATAA ACTCTGGGTA GCTGGTATAG AAGAGCCTTT GGAAGATGGC
TCAAGGGCAA TTGCAAAAAC CGTGAAGCTA AAAGATATAG CTATGGCAAC TTCTGGAAAC
TATAGAAAAT ATAAAATAGA CAGTCTTTCT GGTCAAAAAT ATGTACATAC AATTAACCCT
TTAACAGGTT TTCCTGAGCA GAATGACATG TTAAGTGCTT CTGTATTTGC TCAAACTTGT
GCAGAGGCAG ATGCCTATGC AACCACGTTT ATGACAATGG GTTTTAAAAA GTCTAAACAA
CTACTTGATT CTTTACAAAG TATAGATGCT TATCTTATGT ATTTAAATAC CGATAATGAG
ATAGAAGTGT ATGTAACAAA AGGCATAGAG CCTTTTATAA ATTAA
 
Protein sequence
MKKCLFLLVI FFIWSCNNND QNEKRISGNA LGTTYQIIYF DNLDEEVFTK DMDSLLYAVN 
SSLSTYQSDS DISKLNAGDT TIVIDDMFTE VFQLSKKIHK ESSGYFDPTV GNLVNAYGFG
SKKFTTVVDS TVIDSLTTYV GLDKVVLNKN RTISKKHPEV YLEFNSIAKG YCLDRISTYL
KEKDISNFLI ELGGELVASG SKQPENKLWV AGIEEPLEDG SRAIAKTVKL KDIAMATSGN
YRKYKIDSLS GQKYVHTINP LTGFPEQNDM LSASVFAQTC AEADAYATTF MTMGFKKSKQ
LLDSLQSIDA YLMYLNTDNE IEVYVTKGIE PFIN