Gene CA2559_12083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12083 
Symbol 
ID9297906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand+ 
Start bp2626530 
End bp2627093 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content30% 
IMG OID 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_003717158 
Protein GI298208979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAA CAAAACAATA TAACGAACAC GATGTGATTC AAAAAGCAAT GAACCTTTTT 
TGGAAGAATG GCTATGAAAC CACATCTATA CGTATGCTGG AAAAAGAAAT GGGAATTAAT 
CAATTTTCTA TATACTCTAG TTTTGGAAGT AAACATGGTG TATTTGTAGA AAGTATTAAG 
GCGTACAAAG TTCAGTTGAA TTTTATTAGA CATAAATTAA GAGATTCTAA CTCTGGTACA 
ACTGGAATTA AACAGTTCTT TTATGATTTT TTAGAATTCA CAAAAGACAA TACCTCTAGA 
AAAGGATGCT TAGTTTGTAA CACCGTTAGT GAACTTGGCA ACAATGCAGA AGAGGATTTA 
ATGAAAGAGT TATTAAAGTT TACAGAAGAA ATTAAAGTTC TGTTTATAAA CAACTTAAAA 
CAGGAAACTA CAAAGACAAA AGAAGATATT ACAAGAGAAT CTAACTACTT AATGACATCT 
ATGCTAGGAT TGTCGTTAGG TTCTAGAATT CTTAACGACG AACAACTAGA CGATTATATA 
GAAACAACAT TTAAAAATAT ATAA
 
Protein sequence
MARTKQYNEH DVIQKAMNLF WKNGYETTSI RMLEKEMGIN QFSIYSSFGS KHGVFVESIK 
AYKVQLNFIR HKLRDSNSGT TGIKQFFYDF LEFTKDNTSR KGCLVCNTVS ELGNNAEEDL 
MKELLKFTEE IKVLFINNLK QETTKTKEDI TRESNYLMTS MLGLSLGSRI LNDEQLDDYI 
ETTFKNI