| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_11498 |
|---|
| Symbol | |
|---|
| ID | 9297787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2503594 |
|---|
| End bp | 2506650 |
|---|
| Gene Length | 3057 bp |
|---|
| Protein Length | 1018 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_003717041 |
|---|
| Protein GI | 298208862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA AATTCAGTTT AGTTGTAATT GTTGCACTGT GTTTTCACAG CTTTGTTTTT
GCACAAGACA ATTATAAAGT TACAGGAACA GTTGTAACAG CTAATGACAA CATTCCCTTT
CCAGGAGTTA ATGTTCTTGT AGTAGGAACC TCAAATGGAG CAACCACAGA CTTTGATGGT
AATTACAGTA TTACTGTAAA AAAAGGAGAT GTCCTCCAAT TTTCTTACGT AGGATTTGTA
ACACAAACCG TAATAGTAGA TAATCAGCAA ACTATAAATG TAGGTCTGGT TGAAGATGCT
AGTAAATTAG ATGAGATTGT AGTAATAGGA TATGGTACAC AATCCAGAGA AAAAATTACT
GGTGCCATAG GGAAAGTAAA AAATGAAGAT TTAGATCAAA TTGCAGTAGG TACTGCTAAT
GAGGCTCTTG TAGGACAAGT AGCAGGTTTA AATGTTCAAG CAACCGAGAG TGAAGCTGGT
TCAGAATCTA CAATAACAAT TAGAGGTGTA GGATCAATTG CAGGTCGTAA TGGCCCTTTA
CTTGTGGTAG ATGGCGTTGT TTTAGAAAGC AGCTTTCTTA CCAGTATAGA TGTTAATGAT
ATTGCCTCTG TTGAGGTTTT AAAAGATGCA TCTTCTGCAG CCATATATGG TTCTAGAGCT
GTTGGTGGTG TTGTTATTAT TACAACCAAA GAAGGTAAAG AAGGTAAAAC ACAATTTACG
TATAACACTT TTACAGGTTT TAAAGAAGCC ATAAAAAGTG AAGATTATGA TTTAAGTGTA
GCAGATCACC ATGCAAGAGA GCTTGCTTCA ACTGGTGAGT TGTCTTTAAG ATCTCAATAC
AGAGAGTTGT TAGGAGTAGA TGAATCTTGG CAAGATAGAG TATTTGATGG TGGTAAGATA
GAAAGTCATT TTTTAAGTGC TCGTGGCGGA AGTAAAAGAA CAAAATTTAA TACATCACTT
AGTTATTTAC ACGATGAAGG TGTTTTAGTA ACAGATGATT ATAAAAAATA TAACTTCAAG
TTTAAGGTAG ATACAGAAGT AAATGACAAC TTTAAATTTG GTGCAAATCT TTCTCCATCT
GTAACAAATA GAAGACGTTT TGATGGTTCT GTACATGATA TTTTAAGACA GCAGCCTTGG
TTACCAACGT ATCATGATGC AAACTCTATT CAATTTGTAG ATTTTAATAC TTTTCCAGAT
GTACAAATTG GAGATTATGC TCAAGAACGT CACTTTGATA ATTTTGATTT ATTTGGAGAT
GGTAGTGAGC TAGTAGACTT AAGTAGTACA AGTAATACAA ATCCACTTGC AAAAGTTCAG
GAGCGTCATA GAACAGAAGA AAATTTCAGA ATCTATGGAA AGTTTTATGG TCAATATAAA
CTAGCTGAAG GATTAGATTT TCGTCTTTCT TTAGGTGGAG ATTATCAAGA TAGAAGACAA
AGGCGTTATG AAGGTGTATT GGCTAGTAGA AATGGAGCCT CAGATGCTTC TTTAGAAATT
TCTTCAAGAA ACAGAACACA CATACTTACA GAAGCTCTAC TTACATATGA TAAGTCATTT
GGAAGTCATG ATATTAATGT TGTATTAGGA ACATCTGCAG AAACGTTTGA TACAACTTAT
GAGTCTGCAA CAGGTATAGG GTTTACAAAC GATTTATTAC AAACGCTTAG TGCAGCACCA
ATTATTTCAG CTAAAGAATC TTACGAAATA GAGGAGCGAT TACTATCCTA TTTTGGTCGT
GTAAACTGGT CTTTTGAAAA CAAGTATTTG GCGTCTGTTA GTTTAAGAGC AGATGGTAGT
TCTGTATTTG GAGCAAATAA TAAATATGGA TTTTTCCCAG CAGCTTCTGT TGGATGGAAT
ATAGCTAAAG AAGATTTCTT ATTAGATAGT GACTTCTTAA GTACCTTAAA ACTTAGAGGT
AGTTACGGGT TTACAGGAAA TAAAGATTTA GATGTAAATA ATATTATAAT AGAAAGCTAT
CCTTCACTAC AACTTTATGG TTCAGAAACT GCTGTAAATG GTACAGCCAT AAACAATGGT
TTTGCACCTA TCAATATTGC TAATCCAGAT TTAAAGTGGG AGCGCGTACG TGAAGTAAAT
GCAGCAATAG ATTTCGGATT TTATAACAAC CGAATTTCTG GAGCATTAGA TGTTTACAAT
AAAAAAAGTG ATCAATTATT ATTAAATGTT CCTATTTCAA CAATAACAGG GTTTAGAGAT
GCACTTGTAA ACAGAGGTGC TGTTGAAAAT AGAGGTGTTG AGCTTGAGTT AAGAACAATA
AATATTACTA ACCAAGACTT TAAGTGGACA ACAACCTTAT TAGGTTCTAC TAATAAAAAC
GAACTGGTTG ATTTTGGAGG TGCAAGTGGT CTTATCTCTA ATGTAGATGA TAAAAGAGCA
GCAGAGTGGA TTAACCTTCA AGGACAACCA ATTTCTTCGT TTTATGGGTT TGTTGTAGAT
CGTGAAATTC CAGAAGAATT TATTGTAGAT CCTTATAGAC TTGTAGGTGC ACAAGCACAA
GATGTTTATG TAAAAGATTT AAACGGCGAT GGTGTTATAG ATGATGATGA TAAAACTATA
ATTGGAGATC CTTATCCAGA ATTAATTTGG AGTATAGCAA ATGACTTTAG ATATAAGAAT
ATAGATTTCA GTTTTACTTT CCAAGGAAGT TATGGTGGTC AAGTAAGAAA TATGACAGAC
CAATACATCT TTAACCACTT TAATAGCTCA CAAGATTTTA ACCAAAACAC TACTCCAGAT
CAAGGATTTA TTAGAGAGAA AATTTTTACA GACGCTATTA TTCAAGATGC ATCTTATGTG
GCATTACGTA CGGTGAGTTT AGGTTACACC TTAGACACTA GCATCGTTGA AAAACTAGGA
GTAAGAAAAA CAAGAGTTTA TGCTACAGCT CAAAACTTAT TCTTTGCAAC TGCAGATGGC
TACACAGGTT GGAACCCAGA AGCAATTAGA GATGAAGGTG TTTTAAATGA AGGTTACCAA
AGAGGTGGCT CTCCAGTAGC TAGGACTATT TCTTTAGGAC TTAACGTAGA ATTTTAA
|
|---|
| Protein sequence | MKLKFSLVVI VALCFHSFVF AQDNYKVTGT VVTANDNIPF PGVNVLVVGT SNGATTDFDG
NYSITVKKGD VLQFSYVGFV TQTVIVDNQQ TINVGLVEDA SKLDEIVVIG YGTQSREKIT
GAIGKVKNED LDQIAVGTAN EALVGQVAGL NVQATESEAG SESTITIRGV GSIAGRNGPL
LVVDGVVLES SFLTSIDVND IASVEVLKDA SSAAIYGSRA VGGVVIITTK EGKEGKTQFT
YNTFTGFKEA IKSEDYDLSV ADHHARELAS TGELSLRSQY RELLGVDESW QDRVFDGGKI
ESHFLSARGG SKRTKFNTSL SYLHDEGVLV TDDYKKYNFK FKVDTEVNDN FKFGANLSPS
VTNRRRFDGS VHDILRQQPW LPTYHDANSI QFVDFNTFPD VQIGDYAQER HFDNFDLFGD
GSELVDLSST SNTNPLAKVQ ERHRTEENFR IYGKFYGQYK LAEGLDFRLS LGGDYQDRRQ
RRYEGVLASR NGASDASLEI SSRNRTHILT EALLTYDKSF GSHDINVVLG TSAETFDTTY
ESATGIGFTN DLLQTLSAAP IISAKESYEI EERLLSYFGR VNWSFENKYL ASVSLRADGS
SVFGANNKYG FFPAASVGWN IAKEDFLLDS DFLSTLKLRG SYGFTGNKDL DVNNIIIESY
PSLQLYGSET AVNGTAINNG FAPINIANPD LKWERVREVN AAIDFGFYNN RISGALDVYN
KKSDQLLLNV PISTITGFRD ALVNRGAVEN RGVELELRTI NITNQDFKWT TTLLGSTNKN
ELVDFGGASG LISNVDDKRA AEWINLQGQP ISSFYGFVVD REIPEEFIVD PYRLVGAQAQ
DVYVKDLNGD GVIDDDDKTI IGDPYPELIW SIANDFRYKN IDFSFTFQGS YGGQVRNMTD
QYIFNHFNSS QDFNQNTTPD QGFIREKIFT DAIIQDASYV ALRTVSLGYT LDTSIVEKLG
VRKTRVYATA QNLFFATADG YTGWNPEAIR DEGVLNEGYQ RGGSPVARTI SLGLNVEF
|
|---|
| |