Gene CA2559_11193 details

Gene Information

• Locus tag: CA2559_11193
• ID: 9297726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2435416
• End bp: 2435973
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 36%
• Product: DNA-directed RNA polymerase specialized sigma subunit
• Protein accession: YP_003716980
• Protein GI: 298208801

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0527801
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACACTAA CCGCCACACA TATTAATGAA ACATTAGAGC GTTGCCGCAA AGGTAATCAA 
CAAGCGCAGC TTTTAATTTA CAAACAGTAT TATCGTGCTA TGTACAACAC GGCATTACGC 
ATTGTGAAAG ACGAAGCAGA AGCCCAAGAT GTCATGCAGG AATCGTTTTT AAACGCCTTT 
ACTAAACTCG ATTCTTTTAA AGGAGATGCC ACTTTTGGTG CTTGGCTTAA ACGTATTGTT 
GTAAATAACA GCCTAACAGC TTACAGAAAA AACTCTAAAC TCAGTGTGGT TGCTTTTCAA 
GATGTAGAAG AACGGTTAGA TGTTCCTGAA GATCAAGGAA TATCTAATTC AGACTCAGAA 
AGCAGTCCTA AAGTAAAGCT CATACTAAAT ACTATGAACT CACTTAAGGA TAATTACAGA 
GTGATCTTAA CATTACATCT TATTGAAGGT TATGACTATG AAGAAATTTG TGACATTATG 
AATTTAACCT ATGCAAATTG TAGGACAATG CTGTCACGCG CAAAAGAAAG TTTACGTTCT 
AAATTACCAG AACTATGA 

 

Protein sequence

MTLTATHINE TLERCRKGNQ QAQLLIYKQY YRAMYNTALR IVKDEAEAQD VMQESFLNAF 
TKLDSFKGDA TFGAWLKRIV VNNSLTAYRK NSKLSVVAFQ DVEERLDVPE DQGISNSDSE 
SSPKVKLILN TMNSLKDNYR VILTLHLIEG YDYEEICDIM NLTYANCRTM LSRAKESLRS 
KLPEL