| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10708 |
|---|
| Symbol | |
|---|
| ID | 9297630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 2333494 |
|---|
| End bp | 2334630 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | probable peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003716885 |
|---|
| Protein GI | 298208706 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.11224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TAACATTTAT ATTAACCAGC ATACTTGCAC TCGCCTTATT TAGTTGCGGA
GAAAAGTACC CAGATTTAGA AGATGGTCTT TATGCTGAGT TTATTACCAA TCAAGGTACA
TTTGTTGCTA AATTATACGA AGAACAAGCA CCTTTAACCA TTGCAAACTT CGTGTCTTTA
GCAGAAGGTA CAAATACAAT GGTAGATAGT ACATATAAAG GAAAGAACTT TTATAATGGT
CTTATTTTTC ATAGAGTTAT TAAAGACTTT ATGATACAAG GTGGTGATCC TGAAGGTACA
GGTCGTGGTG GTCCTGGATA CAAGTTTCCA GATGAAACTA CAGAATCTCT AGCTCATAAC
GATAAGGGAA TATTATCTAT GGCTAATTCT GGGCCTAATA CAAACGGAAG TCAATTTTTT
GTTACTTTAA AAGCCACACC TTGGTTAGAC GGTCGTCATA CTATTTTTGG TAAAGTTATG
ATAGGTCAAG AAGTTGTAGA TACTATAGGA AAAGTTGAAA CTACTAAACC TGGAGATAAG
CCTGTTGAAG ATGTTGTAAT TAATGAATTA AACATTATTA AAAAAGGTAG TAAATACAAA
AAATATGATG GTGCAAAAGC TTATGAAGAA ACTTTAAAAA ACATTGAAAC TTCTAAAATT
GAGGAAGCTA AGCGTTTAGA AGAAGTTAAG ATGAATAAGG CTAAAGAAAT TGAAGCACTT
AAAAAAGAAG CTACGACTTA TGACAGTGGC TTATCTATGG TAATTACTAC AGAAGGTGAA
GGCCCTAAAC CAAATACTGG AGATGCAGTT ACTGTAAATT ATGCTGGTTA TTTAGAAGAC
GGAACTTTAT TTGATTCTAA CATTGAAAAG ATTTCTAGAA CATATAACAT TTTTAATGCA
AACCGTAAGA AAAAAGATGG GTATACACCA ATGCCAACAC TTTATAGCCC AGATGCAGGC
CTTATACAAG GTTTTAAAGA TGCAATGCAG ATGATGAAAG TTGGAGATAA AGCTACTGTG
TTTATTCCTT CTCATTTAGC TTATGGTGAA CGTGGTGCAG GACAAGCAAT TAAACCAAAC
ACAGATTTAG TATTTGAGTT AGAGTTGGTT GAGATTACAC CTAAGACAAA GAAGTAA
|
|---|
| Protein sequence | MKRLTFILTS ILALALFSCG EKYPDLEDGL YAEFITNQGT FVAKLYEEQA PLTIANFVSL
AEGTNTMVDS TYKGKNFYNG LIFHRVIKDF MIQGGDPEGT GRGGPGYKFP DETTESLAHN
DKGILSMANS GPNTNGSQFF VTLKATPWLD GRHTIFGKVM IGQEVVDTIG KVETTKPGDK
PVEDVVINEL NIIKKGSKYK KYDGAKAYEE TLKNIETSKI EEAKRLEEVK MNKAKEIEAL
KKEATTYDSG LSMVITTEGE GPKPNTGDAV TVNYAGYLED GTLFDSNIEK ISRTYNIFNA
NRKKKDGYTP MPTLYSPDAG LIQGFKDAMQ MMKVGDKATV FIPSHLAYGE RGAGQAIKPN
TDLVFELELV EITPKTKK
|
|---|
| |