Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_10333 |
Symbol | |
ID | 9297556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 2252939 |
End bp | 2254798 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | 30S ribosomal protein S1 |
Protein accession | YP_003716812 |
Protein GI | 298208633 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.869439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG AAAAAACAAC TCCAAAAGTC TTAGAAGAGC AAGTAGACAC TCAAGCTACA GCAACTGCAG AAGAGACTAC AAAAAAAGCA AATTACATCT CTCCAGCTCA GGAAAACCCT GAGAAGTTCC TTGAGGAATT TAACTGGGAA AACTACAAAG AAGGTATTGA GCCTATCGAT GAAGGGAAAC TAGATGAGTT TGAAAAATTA GTGAAAGACA ACTTTGTTGA TACATTAGAT GATCAGTTAA CTACTGGTAC TGTTATTAAC ATTACAGATC GTGATGCTAT TATAGACATT AACGCTAAGT CTGAAGGTGT AATTTCTCTT AATGAGTTCC GTTACAATCC AGATCTTAAA GTTGGTGACA CTGTAGATGT AATGATTGAT GTGCGTGAAG ATGCAGAAGG TCAATTAATA TTATCTCACC GTAAAGCACG TACGATTAAA GCTTGGGAGC GCGTAAATGA CGCTCACGAC GATGGTACTA TCGTTAATGG TTTTGTAAAA TGCAGAACTA AAGGTGGTAT GATTGTAGAT GTATTTGGTA TCGAGGCATT CTTGCCAGGT TCTCAAATTG ATGTGAAGCC AATTCGTGAT TACGATGCTT ACGTTGGTAA AACAATGGAA TTTAAGGTTG TAAAAATCAA CCATGAATTT AAAAACGTTG TAGTATCTCA CAAAGCGCTT ATCGAAGCAG ATATCGAAGA GCAGAAAAAA GAAATTATTG GGCAGCTTGA AAAAGGTCAA GTACTTGAAG GTACTGTTAA AAACATTACA TCTTACGGTG TATTTGTTGA TCTTGGTGGA GTTGATGGAT TGGTACACAT TACAGATCTT TCTTGGTCTC GTATTAACCA TCCAAACGAA ATCGTTGAGC TTGACCAGAA ACTTAACGTT GTTATCCTTG ACTTTGATGA GGACAAAACA CGTATCCAAC TTGGTCTTAA GCAACTAAGC AAGCATCCTT GGGAAGCACT TGGTGATGAG CTAAAAGTTG GTGATACAGT AAAAGGTAAA GTAGTTGTTA TTGCAGACTA CGGTGCGTTT ATTGAAGTAG CTGAAGGTGT AGAAGGTCTT ATCCACGTTT CTGAAATGTC TTGGAGCACG CACTTGCGTT CTGCACAAGA TTTTGTAAAT GTTGGTGACG AGGTAGAAGC TCAGATCTTA ACTATGGATA AAGAAGACCG TAAAATGTCT CTTGGCATGA AGCAACTATC TCAAGATCCT TGGACAGATA TCACGTCTAA GTATCCAGTT GGTTCACGTC ACGAAGGTAT TGTACGTAAC TTTACAAACT TTGGTGTGTT TGTTGAATTA GAAGAAGGAA TTGATGGATT AATTTACATC TCAGACCTTT CTTGGACTAA GAAAATTAAG CATCCATCTG AGTTCTGTAA CGTAGGAGAT AAATTAGAAG TAGTTGTTCT TGAATTAGAT GTTGAAGGAC GTAAGTTAAG CTTAGGTCAC AAACAAATTG AAGACAACCC TTGGAACAAG TATGAAGGTG AGTTTGCAGT AGGTACTAAA CACACTGCTA CTATTTCTGA CATAGTTGAC AAAGGTGCTA CTATTGAATT TAACGAAGAT ATTACTGCAT TTGTACCACA ACGTCACCTT GAGAAAGAAG ACGGAAGCAA ATTAGGTAAA GGTGAAGAAG CAGAATTCGT AATTATTGAA TTCAATAAAG AATTCAAGCG TGTTGTTGCA TCTCACATGT CTTTACACAA AGAAGAAGAA GCTAAAATTG TGAAGCAAGC TGCTAAGAAA GCTTCTGAAG CAAATGCTGA CAAACCAACA CTAGGTGATG CTAACGCAGA ACTACAAGCG TTGAAAGATA AAATGGAAGG TAAGAATTAA
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Protein sequence | MAEEKTTPKV LEEQVDTQAT ATAEETTKKA NYISPAQENP EKFLEEFNWE NYKEGIEPID EGKLDEFEKL VKDNFVDTLD DQLTTGTVIN ITDRDAIIDI NAKSEGVISL NEFRYNPDLK VGDTVDVMID VREDAEGQLI LSHRKARTIK AWERVNDAHD DGTIVNGFVK CRTKGGMIVD VFGIEAFLPG SQIDVKPIRD YDAYVGKTME FKVVKINHEF KNVVVSHKAL IEADIEEQKK EIIGQLEKGQ VLEGTVKNIT SYGVFVDLGG VDGLVHITDL SWSRINHPNE IVELDQKLNV VILDFDEDKT RIQLGLKQLS KHPWEALGDE LKVGDTVKGK VVVIADYGAF IEVAEGVEGL IHVSEMSWST HLRSAQDFVN VGDEVEAQIL TMDKEDRKMS LGMKQLSQDP WTDITSKYPV GSRHEGIVRN FTNFGVFVEL EEGIDGLIYI SDLSWTKKIK HPSEFCNVGD KLEVVVLELD VEGRKLSLGH KQIEDNPWNK YEGEFAVGTK HTATISDIVD KGATIEFNED ITAFVPQRHL EKEDGSKLGK GEEAEFVIIE FNKEFKRVVA SHMSLHKEEE AKIVKQAAKK ASEANADKPT LGDANAELQA LKDKMEGKN
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