| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10253 |
|---|
| Symbol | |
|---|
| ID | 9297540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2239375 |
|---|
| End bp | 2240298 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003716796 |
|---|
| Protein GI | 298208617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00229932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTAT TACAAGCAAC TACTACTAAT AATGAATTAA CAATAGTAGA GTCTACAGTA
AACTTTTACA ATGCGTTTAT TGCACAACTT CCAGCAATAG GGTTAGGCTT GCTCATCATA
ATTTTAGGTG TAATCATAGG GACTTGGATA GGTAACTTCT CACGTAGGCG TATTTCTGCA
CGTACACAAG ATCCTTTAAT GAGTAAGTTT TTAGGAAAAG CTATACGGTT TCTCTTTATA
GTTATTGCTA TAATGATAGG ATTACGTGCA GCAGGTTTGG GTGGTATTGC TACTGGTATA
TTAACTGCTG CAGGTGCAAG TGCCGTAGTG TTAGGTTTTG CCTTTAAGGA TATAGGTGAA
AATTTTATAG CAGGTATAAT TCTTACGTTT AACAGACCAT TTGATGTAAA TGATACTGTA
GCCATAGGCG ATAATTTCGG AAAAGTAAAA GAGTTAGAGT TTCGGTATAC AAAACTTAAA
ACCTTCGACG GTAAAGATGT GTATATTCCT AATAGTGACG TTCTTACAGA ACCTGTAACC
AATTATACAG AAGACGGATT TTTTAGATGG GATTTCATAA TAGGAATAGC CTATGAAGAT
AATATTGAAG GAGCTAAAAA AGTAGTATTA GAGGCTTTGA GAAAAGAACC CAATGTTGTT
GAAGATGAAG AACATGTAAA TTTTGTGATA GAAGATGAAC TTGCAACTAG TACAGTAAAC
TTAAAGGTGT TCTTTTGGGT AGACACCTAT GATTTTAGGC GTATGGCACT TATTACCAAG
GGAAATGTGG TAAGAAATGT AAAAGAAGCA CTCGAAGAAC ACGGTTTCTA TATGCCAGCA
GATATTCAGG AAATTAAACT TTACGGTGGC GAAAAAGAAT TTCCTGTTCG TATAGCACAA
CAGCTAAAAG AACCTAAAGA CTAA
|
|---|
| Protein sequence | MLLLQATTTN NELTIVESTV NFYNAFIAQL PAIGLGLLII ILGVIIGTWI GNFSRRRISA
RTQDPLMSKF LGKAIRFLFI VIAIMIGLRA AGLGGIATGI LTAAGASAVV LGFAFKDIGE
NFIAGIILTF NRPFDVNDTV AIGDNFGKVK ELEFRYTKLK TFDGKDVYIP NSDVLTEPVT
NYTEDGFFRW DFIIGIAYED NIEGAKKVVL EALRKEPNVV EDEEHVNFVI EDELATSTVN
LKVFFWVDTY DFRRMALITK GNVVRNVKEA LEEHGFYMPA DIQEIKLYGG EKEFPVRIAQ
QLKEPKD
|
|---|
| |