| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10218 |
|---|
| Symbol | |
|---|
| ID | 9297533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 2232362 |
|---|
| End bp | 2234251 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | potassium efflux system protein |
|---|
| Protein accession | YP_003716789 |
|---|
| Protein GI | 298208610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.275603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAA GTTTACTATT TCAAGCTATT GTATTTTTGG CAGGTGCAAT AATCTGCGTT
TCAATTGTTA AACGGTTAGG GTTAAGCTCT GTTTTGGGGT ATTTGTTAGC TGGTGTGTTA
ATAGGACCTT ATGTGTTAGG TTTTATAGGA GAAGAAGGTG ACGATATCTT ACACTTCGCA
GAATTTGGAG TAGTGGTAAT GCTATTCTTA ATAGGCCTGG AAATTGAACC AAAAAATTTC
TGGAAAATGC GAAAATCTAT ACTTGGTATG GGTGGTATAC AAGTAGGGCT TACCATGATA
TTTACCTACG CATTTTTCTA TGTGATGGGT TATACTTGGC AAGTTTCCTT AGTAATTGCA
ATGGCAGTTG CACTATCATC TACCGCAATT GCCTTACAGA CCATCAAGGA AAAAGGACTT
ATGGAGACTA CTTTTGGCTC GTCTTCTTTT TCTATACTAT TGTTTCAGGA TATTATAGTA
ATTTTCATGT TAGGAGCATT ACCATTACTT TCTAATGCAT CTTCAGAGCC TACAACAAAT
GATCATAGTA ATACTGCTAG TTTAATTGAA AGCTTACCTA TTGGTTTTCA AACCTTAGCA
ATTATAGTGT CTGTAGTTTT AATAGTGTTG GCAGGCCGTT ATTTAATAGC ACCAATGTTG
CGCAAAGTTG CAAAAACTGG TGTTCGTGAA ATGCTAATTG CTGCTGCCTT TTTAATTGTT
TTCGGCATAT CATTCTTAAT GGAGTTTGTG GGGTTAAGTC CTGCATTGGG AGCCTTTTTA
GGTGGCGTTG TATTGTCTAA TAGTGAGTTT AAACACGAAT TAGAGAGCAC TCTAGAACCC
TTTAAAAATT TACTTTTAGG GTTGTTTTTT ATGGCTGTTG GTGCTTCAAT AAACTTTATT
GTTATAGCTA AAAGTCCGTT TACTATAGGC GGTATTTTGT TGGCCATCAT AGTACTTAAG
GCTGCAGTAT TATTTATTAC AGCACAAGTT TTTAAATTAA AACTAGATCA AAAATTACTG
CTTACCTTTA GTTTAGCTCA AGTAGGTGAG TTTGCATTTG TACTCTTATC TTTTGCATTT
CAGTTACATA TTTTAAACCA AGAACAAATA GATATTATGC TAGTTATAAC GGCATTATCT
ATGTCTTTAA CACCAATTAT TGGTCTTTTA AATGAGCGCT TACTACTACC GAGATTTGGC
ACCAAAGAAT CTATTAAACG ACCAATGGAT CATATTGCAA AATCTCAAAA AATTATATTA
GTTGGATTTG GTCATTTTGG AAGTACAATT GGAAGGTTTT TACGGTCTCA TGGTGTTGAA
GCAACCATTT TAGATCAAGA TTCTAATAGA GTAGATTTCT TAAGAAAAAT GGGGTTTGAA
GTGTATTATG GAGATGCTAC ACGCTTAGAT CTGTTAGAGT CTGCAGGTAT TGCTGAAGCT
AAAATTGTTA TTTGTGCCAC AAATAAAATT GGCGTTTCCA AAGCTATAAG TTCAATAATT
AAAGAGAAGT ATCCTCATGT TGAACTTATG ATTCGTACTA AAAACAGATA TGATGCTTAT
GAATTGTTAA ACCTAGGTCA CGAAAATATT TACCGCGAAA CTTTAGATAC ATCTTTAGCA
TTGGCGAGTG ATGTTTTAAA CAAGTTAGGA TTCAGAAAGT ATACGCTTAG TAGACAAGTG
CAAAATTTTA TTAAATACGA TGAAACTAGT TTGAGGCGAT TAGCAAAAGA GCCTAAACGA
GAAGAAGACT ACATTTTTAA AGCTCGAAAA GAACTAGAAG AACAAGAAAA GCTATTAGAA
CAAGACTTTA AGCGCGGTGT TGTAGATTAT GATAACCATT GGGATGGTGA GCATATACGC
AACACTTTAA AAACCTCTAA AACTACTTAA
|
|---|
| Protein sequence | MTGSLLFQAI VFLAGAIICV SIVKRLGLSS VLGYLLAGVL IGPYVLGFIG EEGDDILHFA
EFGVVVMLFL IGLEIEPKNF WKMRKSILGM GGIQVGLTMI FTYAFFYVMG YTWQVSLVIA
MAVALSSTAI ALQTIKEKGL METTFGSSSF SILLFQDIIV IFMLGALPLL SNASSEPTTN
DHSNTASLIE SLPIGFQTLA IIVSVVLIVL AGRYLIAPML RKVAKTGVRE MLIAAAFLIV
FGISFLMEFV GLSPALGAFL GGVVLSNSEF KHELESTLEP FKNLLLGLFF MAVGASINFI
VIAKSPFTIG GILLAIIVLK AAVLFITAQV FKLKLDQKLL LTFSLAQVGE FAFVLLSFAF
QLHILNQEQI DIMLVITALS MSLTPIIGLL NERLLLPRFG TKESIKRPMD HIAKSQKIIL
VGFGHFGSTI GRFLRSHGVE ATILDQDSNR VDFLRKMGFE VYYGDATRLD LLESAGIAEA
KIVICATNKI GVSKAISSII KEKYPHVELM IRTKNRYDAY ELLNLGHENI YRETLDTSLA
LASDVLNKLG FRKYTLSRQV QNFIKYDETS LRRLAKEPKR EEDYIFKARK ELEEQEKLLE
QDFKRGVVDY DNHWDGEHIR NTLKTSKTT
|
|---|
| |