| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10063 |
|---|
| Symbol | |
|---|
| ID | 9297502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2201836 |
|---|
| End bp | 2204985 |
|---|
| Gene Length | 3150 bp |
|---|
| Protein Length | 1049 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | putative AcrB/AcrD family RND transport protein |
|---|
| Protein accession | YP_003716758 |
|---|
| Protein GI | 298208579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.133163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA CATTTATAGA GAGACCTGTA TTATCTACAG TAGTCTCCAT AGTCATTGTT
ATATTAGGAA TCTTAGGTCT TTCTACGCTT CCTATTGAAC AATATCCAGA TATTGCACCA
CCAACTATAC AAGTAACTGC CACCTATCCT GGCGCGAGTG CAGAAACCAT ATTAGAAAGT
GTAATAATTC CTATTGAGGA ACAAATTAAT GGTGTGGAAG GTATGACCTA CATAACATCA
GACGCTACTA ATAATGGAAC CGCTAATATT ACTGTTTTCT TTGATCAAGA TGTAGATCCA
GATATCGCTG CTGTTAACGT ACAAAACCGT GTTGCAAGAG CAAACCCATT ATTGCCGCAA
GAGGTTATAC AAACAGGAGT GCAAACACAA AAGCAACAAA CTAGTGCTTT AATGTTTATG
TCTGTACTTT CTAAAAATGA AGATTACAAT GACACTTATA TACAGAATTA CCTAAGAATT
AATGTAATAC CATCTTTACA ACGTGTTAAC GGTGTTGGAG ATGTTAATGT ATTTTCGAGA
CAAGATTACG CCATGCGTAT TTGGTTAAAA CCAGAGAAAC TTGCTGCTTA TGGTCTTATA
CCGGCAGATG TTTCTGCAGC TTTGAGTGAA CAAAACTTAG AGGCATCTGC AGGATCCTTA
GGACAAAATA ATGGAGAAGC TTTTACATAT GCTATCACTT ATAGTGGTCG ATTTAAGACG
GCAGAGCAAT ATGAGAATAT TGTTATTAAA GCATTAGATA ATGGCGAATA CTTAAGGCTT
AATGATATTG CAAAAGTAGA ATTAGATGCC CAAGGTTACG ACTCAAGCTC CACTACCAAT
GGTTATCCTA GTATTAATTT GGCCATTTAT CAAACTGCAG GATCTAATGC ACAAGAGATT
ATTGAAGATA TTAAATCTGA ATTAACTCGA CTTGAGAAAG ATTTTCCAGA AGGAGTTGAA
GCATTTATAA ATTACGATAC CAATAACTTC CTTTCTGCAT CTATTGAAAA AGTGGTGCAT
ACTTTATTAG AAGCATTTTT ATTAGTGTTT ATAGTTGTAT TTATATTCTT ACAGGATTTT
AGGTCAACTC TTATTCCTGC TATAGCCGTA CCAGTTTCGA TAATAGGAAC ATTTTTCTTC
CTAAACCTTT TTGGTTACTC TATTAACCTG TTAACGCTGT TTGCAATGGT ACTCGCCATA
GGTATTGTGG TAGATGACGC CATTGTGGTT GTCGAGGCTG TACATGCCAA GTTAGATGAA
GGTGCAAAAA GTGGAAAAAA GGCAACTTTA ACCGCTATGA ATGAAATATC TGGTGCTATT
ATATCTATTA CATTAGTAAT GGCAGCAGTG TTTATTCCAG TAACGTTTGT ACAAGGTCCT
ACAGGTGTAT TTTACGAACA GTTTGGTGTA ACTTTAATTG TAGCCATCTT AATTTCGGCA
ATTAATGCAT TAACGTTAAG TCCTGCATTA TGTGCCTTAT TTTTAAAACC ACATAATGAA
GATGCTCAAG AGAAAAAAGG GTTTTTACAA CGTTTTTATA GGGCTTTTAA CCGTGGTTTT
AATGCTACAA TACAACGCTA TGGGCGTTCT CTAAGTTTTC TGTACAGACA AAAATGGATT
ACAGTTGCTA TTCTAGTTTT AGCTGGAGTT GGTATATGGT GGTCTGCCAC TACTACACCA
ACTGGTTTCG TGCCTACAGA AGATAGAGGT TTAATATTTA TTAATGTTGA ATTACCTGCA
GGCTCATCTA TAGATAGAAC AAATGAGATA AACCAAGAAA TTTACAATCA AGCAAAAGAG
TTGGAAGGTG TAGATGGAAT CTCGCTTATA AATGGTCGTA GTTTAATTAG TGGATCTGGT
AGTAATTACG GATTAGGCTT TATTAAACTA AAAGATTGGT CAGAGCGTGA GGATGAAAGC
CTATCTACAG AAGCTATAAC TAAGCGTTTA TTTGGTATTG CTGCGGGTAT TCCAGAAGCA
AAGATTATAT TTTTTGCGCC TCCTAGTATT CCAGGATTTG GATTATCATC TGGGTTTGAG
GTAAACTTGC TAGACCGTAC TGGTGGAGAC TTTAAAGACT TAGATGCTGC AACACAAGAG
TTTATTGGCA ATTTAATGTC GCATCCAGAA ATACAATATG GCCAATCTTC TTTCAATACA
AAGTATCCAC AATATGAGAT GGATATTAAT GTACCGTTAG CTAAAAAGTT TGGAGTTCCT
GTAAGTAGTA TTTTCTCTAC TATGCAAGGA TATATTGGTG GTGTATATGC ATCAGACTTT
GCAAGGTTTG GTAAGCAGTA TCGTGTATAT ATGCAAGCGT TACCCGAAGA TCGTACAGAT
AAAAATTCTT TAAATGAGAT TTATATTAAA ACTGGCAGTG GTGAAATGAC TCCTATTACT
CAGTTTGTAA CACTTAATAG GGTTTATGGA CCACAAACTG TAACACGTTT CAACTTATAT
AATTCAACTA AAGTAAGTGG TGCTGCTAAT CCTGGTTTTA GTACTGGAGA TGCATTGGCA
ATTGTACAAG AAGAAGCTGC AAAATTATCA AGTGAATATG ACATCGCATT TTCAGGACTT
TCTAGAGAAG AAGTTAGTGC TGGAAATCAA ACTGTGATTA TTTTCATGCT ATGTATTCTA
TTTGTTTACT TTTTATTGGC AGCACAATAT GAAAGCTACC TACTACCCTT TTCTGTAATA
TTATCATTAC CCTTAGGTGT ATTTGGAGCC TTTTTTACTA CCAAGGTATT AGGATTAGAA
AACAACATCT ATTTTCAAAT AGCATTAATC ATGCTAATAG GGCTATTAGC TAAGAATGCC
ATACTAATTG TAGAGTTTGC CTTGCAACGC CGTAAGCAAG GTGAGCCAAT TGTAGATGCT
GCAATAGATG GTGCTAAAGC AAGATTAAGA CCAATTTTAA TGACATCTTT TGCCTTTATT
TTAGGACTTA TGCCACTTGT GCTTGCTAAA GGTGTAGGTG CAGAAGGAAA CAGATCTATA
GGTTCTGGTG CAGTTGGAGG TCTTCTTATA GGTACCATTC TTGGTGTATT TGTAATCCCT
ATTCTATTCA TCTTTTTCCA ATGGCTACAA GAAAAAATTT CTGGCAGCCC TCAACTACAA
GAATCTAAAA AATTAGAAGA AACAATTTAG
|
|---|
| Protein sequence | MLKTFIERPV LSTVVSIVIV ILGILGLSTL PIEQYPDIAP PTIQVTATYP GASAETILES
VIIPIEEQIN GVEGMTYITS DATNNGTANI TVFFDQDVDP DIAAVNVQNR VARANPLLPQ
EVIQTGVQTQ KQQTSALMFM SVLSKNEDYN DTYIQNYLRI NVIPSLQRVN GVGDVNVFSR
QDYAMRIWLK PEKLAAYGLI PADVSAALSE QNLEASAGSL GQNNGEAFTY AITYSGRFKT
AEQYENIVIK ALDNGEYLRL NDIAKVELDA QGYDSSSTTN GYPSINLAIY QTAGSNAQEI
IEDIKSELTR LEKDFPEGVE AFINYDTNNF LSASIEKVVH TLLEAFLLVF IVVFIFLQDF
RSTLIPAIAV PVSIIGTFFF LNLFGYSINL LTLFAMVLAI GIVVDDAIVV VEAVHAKLDE
GAKSGKKATL TAMNEISGAI ISITLVMAAV FIPVTFVQGP TGVFYEQFGV TLIVAILISA
INALTLSPAL CALFLKPHNE DAQEKKGFLQ RFYRAFNRGF NATIQRYGRS LSFLYRQKWI
TVAILVLAGV GIWWSATTTP TGFVPTEDRG LIFINVELPA GSSIDRTNEI NQEIYNQAKE
LEGVDGISLI NGRSLISGSG SNYGLGFIKL KDWSEREDES LSTEAITKRL FGIAAGIPEA
KIIFFAPPSI PGFGLSSGFE VNLLDRTGGD FKDLDAATQE FIGNLMSHPE IQYGQSSFNT
KYPQYEMDIN VPLAKKFGVP VSSIFSTMQG YIGGVYASDF ARFGKQYRVY MQALPEDRTD
KNSLNEIYIK TGSGEMTPIT QFVTLNRVYG PQTVTRFNLY NSTKVSGAAN PGFSTGDALA
IVQEEAAKLS SEYDIAFSGL SREEVSAGNQ TVIIFMLCIL FVYFLLAAQY ESYLLPFSVI
LSLPLGVFGA FFTTKVLGLE NNIYFQIALI MLIGLLAKNA ILIVEFALQR RKQGEPIVDA
AIDGAKARLR PILMTSFAFI LGLMPLVLAK GVGAEGNRSI GSGAVGGLLI GTILGVFVIP
ILFIFFQWLQ EKISGSPQLQ ESKKLEETI
|
|---|
| |