| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09918 |
|---|
| Symbol | |
|---|
| ID | 9297472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2168965 |
|---|
| End bp | 2170446 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | D-glutamate deacylase |
|---|
| Protein accession | YP_003716729 |
|---|
| Protein GI | 298208550 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATT TACCGCAGTT AAAAAATAGT AGAGTGTTTA TGAGATTCGT TTTTTATTCA
TTAGTCGTAT TACTCGTTTT TTCTTGTAAG AAAGCTAAAG AGCCAAATAC TATATATGAT
ATTGTTATTG AAGGTGCTCG CGTTATAGAT CCAGAAACAC AAACAGATAG CGTCTTAAAT
GTTGCAATAC AAAATGATAA GATAGCTATA CTTACAACTG AAAGCTTAAA AGGTAAAAAG
GTTATTGATG GTCGTGACAA AATCTTGTCG CCTGGCTTTA TAGATTTACA CGCACACGGT
CAAACAAACC TCGAAAATGA ATATCAAGTT TTTGATGGTG TTACCACAGC TTTAGAATTA
GAAATTGGTA TTGATACCTT AAAGCAATAT TACCAAGCAA GAACCGGAAA CGCATTGCTA
AATTTTGGAG CTTCTGCTTG CCAATTGGCG TATAGAAATA AGGTTATCGT CAAAGATGAT
AGAGTTTACA ACACTATTTA TGAGGAGTTA AACGACTCCG CTGTTAATGT AGCACTTACC
GAAGATAAGT TTTCAAGGTT AAGAGAAAAA CTTAAAGATG CATTAAATTA TGGTGCTATT
GGTATTGGTG TTCCTGTTGG TTACTTGCCT AATGCATCAA TAAAAGAGAT TGAAGACGTC
TATGCCTTTG CAGGTACGCA TAATATTCCT GTTTTCTCAC ACATACGTGA AGGTGGCGCT
ATAGCGTTTC AACAAGCAAT TAGCGATGCT ATTTTAAACA AAACGCAACT ACATCTCTGT
CATTTACCAA GTATGGCTCG AAAGGATATC GCTTTCTGTT TAGATGCTGT TGAAAAAGCT
CAAGCTCTTG GTTTTCCCAT TTCAACAGAA TTATATCCAT ACACTGCTGG AAATACTGAA
ATAGGATCCG CAATTTTTAA TGAAGGTTGG CAAGAGCGAT TAGGATGCAC CTACCAAGAC
TTACAATGGG TTGAAACTGG CGAACGATTA ACACCCGAAA CATTTAAAAC TTATAGAAAA
AAAGGTGGAT CTGTAATTGT ACATATGATG AAAGAAAAAT GGGTAGATAG TGCAATGGCT
TCTAAAACAA CAATGATTGC TAGTGATGGT GGCTCATATT CTCCATTAGG ACATCCAAGA
TCTTCAGGAA CATTCTGTAA AACAATACAT ACTTATGTAA AAGAAAAACA GCTTATCACA
ATTAATAATG CTATTGAAAA AATGACACTA ATGCCGGCCA AGGTATTGGA AGGTATTGTT
CCAGATATGA AATTAAGAGG CAGAACACAA CCAGGAAGCT ACGCAGACCT ACTGCTTTTT
AATTTAGATG ATATTAAAGA TAATGCCACA TATACAAAAG GATTTCAGAA ATCTTCTGGA
ATGGATTATG TGATTGTAAA TGGTAAGATT CTTATTGAAC ATGGTGAGTT ACAAGTTAAT
TTATTTCCTG GAAAAGCTAT AAAAAGTCAA CTCAACTTAT GA
|
|---|
| Protein sequence | MAHLPQLKNS RVFMRFVFYS LVVLLVFSCK KAKEPNTIYD IVIEGARVID PETQTDSVLN
VAIQNDKIAI LTTESLKGKK VIDGRDKILS PGFIDLHAHG QTNLENEYQV FDGVTTALEL
EIGIDTLKQY YQARTGNALL NFGASACQLA YRNKVIVKDD RVYNTIYEEL NDSAVNVALT
EDKFSRLREK LKDALNYGAI GIGVPVGYLP NASIKEIEDV YAFAGTHNIP VFSHIREGGA
IAFQQAISDA ILNKTQLHLC HLPSMARKDI AFCLDAVEKA QALGFPISTE LYPYTAGNTE
IGSAIFNEGW QERLGCTYQD LQWVETGERL TPETFKTYRK KGGSVIVHMM KEKWVDSAMA
SKTTMIASDG GSYSPLGHPR SSGTFCKTIH TYVKEKQLIT INNAIEKMTL MPAKVLEGIV
PDMKLRGRTQ PGSYADLLLF NLDDIKDNAT YTKGFQKSSG MDYVIVNGKI LIEHGELQVN
LFPGKAIKSQ LNL
|
|---|
| |