| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09888 |
|---|
| Symbol | |
|---|
| ID | 9297466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2160329 |
|---|
| End bp | 2163010 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | putative heat shock ClpB protein |
|---|
| Protein accession | YP_003716723 |
|---|
| Protein GI | 298208544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATTT ATGCCATTTT AGCAGTGTAT TTAAATGGTA TACCAATTGC TTATCTAGCT
ATAAAACTTA AGAAGATGAA TTTTAATAAT TATACTATAA AATCACAGGA GGCCATACAG
CAAGCGCAAC AGCTTGCTCA GGAAATGGGC CATCAACAAA TAGAAAATGA ACACATTTTT
AAAGCTATAG CTACTGTAGA TGAAAATGTG ACTCCATTTT TATTGAAAAA ACTAAATATT
AATGTACCAC TATTCACTCA AATTTTAGAT AAAGAAATCG AAAGTTTCCC TAAAGTAAGT
GGTGGCGACA TTATGTTATC TAGAGAAGCA GGAAAAGCTG TAAATGAAGC TTCTAGTATC
GCAAAAAAAA TGAATGATGA GTATGTTTCA ATAGAACATC TCATATTAGC CATTTTTAAA
TCTAACAGTA AAATTGCACA AATATTAAAA GATCAAGGTA CTACAGAAAA AGGATTAAAA
TTAGCTATTG AAGAATTGAG ACAAGGCGAC AGAGTAACTT CGCAAAGTGC AGAAGACACT
TATAACTCTT TAAGCAAATA TGCTATCAAT CTTAATGAAC GTGCAGAGAC TGGAAAATTA
GATCCGGTTA TAGGACGCGA TGAAGAGATT AGACGTGTGC TGCAAATACT TTCTAGAAGA
ACTAAAAACA ATCCTATGTT GGTTGGTGAA CCTGGTGTTG GTAAAACAGC TATTGCAGAA
GGCTTAGCTC ATAGGATTAT TGCTGGTGAT ATTCCAGACA ACCTTAAAGA CAAACAAATT
TTCTCTTTAG ATATGGGCGC ATTAATTGCA GGTGCCAAAT TTAAAGGAGA ATTTGAAGAA
CGCTTAAAGG CTGTTGTTAA AGAAGTAACC TCAAGTGACG GAAACATTGT TTTGTTTATA
GATGAAATTC ACACGCTAGT TGGTGCCGGT GGCGGCCAAG GCGCAATGGA TGCGGCAAAC
ATTTTAAAGC CAGCATTAGC AAGAGGAGAA CTAAGAGCGA TTGGTGCAAC AACTTTAGAC
GAGTATCAAA AGTATTTTGA GAAAGACAAA GCTTTAGAAC GTCGTTTTCA AAAGGTAATT
GTAGATGAAC CAGATACAGA AAGCGCAATT TCAATACTAA GAGGTATTAA GGAAAAGTAC
GAGACACACC ATAAAGTAAG AATTATGGAT GAAGCTATAA TAGCTGCTGT GGAATTATCT
GAACGCTACA TTACTAGTAG ATTCTTACCA GATAAAGCTA TTGATTTAAT GGATGAAGCT
GCATCTAAAC TAAGGATGGA GATTAACTCT AAACCTGAAG AGTTAGATGT TTTGGATCGT
AAAGTTATGC AGCTGGAAAT TGAGATTGAA GCTATTAAGC GTGAAAAAGA TGAAGTTAAG
TTAAAATCTT TACGATCAGA TTTAGCAAAC CTTAAGGAAG AACGTAATGA ATTACATGCG
CAGTGGAAAA ATGAAAAGGA TGTTGTAGAC AATATACAAC AGGCCAAACA AGATATTGAG
CAGTTTAAGC TTGAAGCTGA ACGCGCTGAG CGAGAAGGCG ATTACGGTAA AGTTGCAGAG
ATACGTTATG GTAAAATTAA AGAAGCTCAA GAACGCTTAG AGAAACTTCA GCAAAACGTT
GAAGCTCAAA AATCTGGAAA ATCTCTCATA CAAGAGGAAG TTACAAGCGA AGACATTGCA
GAAGTTGTTG CTAAATGGAC AGGTGTTCCG GTAACCAAAA TGTTACAAAG TGACCGTGAA
AAGCTGTTGC GTTTAGAAGA TGAATTACAC AAACGAGTAG TAGGACAACA AGAAGCTATA
GTTGCTGTAA GCGACGCTGT AAGACGTAGC CGCGCAGGTT TACAAGACCA GAAAAAGCCA
ATAGGAAGTT TTTTATTCTT AGGTACCACT GGTGTTGGTA AAACTGAGCT TGCTAAAGCT
CTAGCCGAAT ACCTTTTTGA TGATGAAAGC GCGATGACAC GTATAGATAT GAGTGAGTAC
CAAGAACGTC ACGCAGTAAG TAGACTTGTT GGTGCGCCTC CAGGATATGT GGGTTATGAC
GAAGGTGGAC AGCTTACTGA AGCTGTTAGA CGTAAGCCAT ACTCTGTTGT CCTGTTAGAT
GAAATTGAAA AAGCGCACCC AGATACTTTT AATATCTTAT TACAGGTTTT AGATGAAGGT
AGGCTTACAG ATAATAAAGG TCGAATTGCA GACTTTAAAA ACACCATTAT CATTATGACA
AGTAATATGG GAAGTGGTAT TATTGAAGAG AAGTTTAATG CGGTTAAAGA TATTCCTACT
GCTATTGAAG CTGCAAGAAC TGAAGTTTTA GGTTTACTTA AACAAACCGT AAGGCCAGAG
TTTATTAACC GTATAGACGA TATCGTAATG TTTACGCCTT TAAATCAGGA TAACATTAAA
GAGATTGTAA GCTTGCAGTT GCGACAGGTT ACTAAAATGC TAGGTAAACA GAATATTACG
CTAGATGCTA CTGAAGAAGC AATAAGCCTG TTAGCAAAAC AAGGATTTGA TCCTCAATTT
GGTGCAAGAC CAGTTAAGCG TACAATTCAA AAAGAGGTGC TTAACGAGTT GTCTAAACAA
ATCTTATCTG GAAAGGTAAC TACAGATAGT ATTATTCTTA TAGATGCGTT TGATGATGAA
CTTGTATTTA GAAACCAAAG TGATCTGGTT GAAGATCTAT AA
|
|---|
| Protein sequence | MNIYAILAVY LNGIPIAYLA IKLKKMNFNN YTIKSQEAIQ QAQQLAQEMG HQQIENEHIF
KAIATVDENV TPFLLKKLNI NVPLFTQILD KEIESFPKVS GGDIMLSREA GKAVNEASSI
AKKMNDEYVS IEHLILAIFK SNSKIAQILK DQGTTEKGLK LAIEELRQGD RVTSQSAEDT
YNSLSKYAIN LNERAETGKL DPVIGRDEEI RRVLQILSRR TKNNPMLVGE PGVGKTAIAE
GLAHRIIAGD IPDNLKDKQI FSLDMGALIA GAKFKGEFEE RLKAVVKEVT SSDGNIVLFI
DEIHTLVGAG GGQGAMDAAN ILKPALARGE LRAIGATTLD EYQKYFEKDK ALERRFQKVI
VDEPDTESAI SILRGIKEKY ETHHKVRIMD EAIIAAVELS ERYITSRFLP DKAIDLMDEA
ASKLRMEINS KPEELDVLDR KVMQLEIEIE AIKREKDEVK LKSLRSDLAN LKEERNELHA
QWKNEKDVVD NIQQAKQDIE QFKLEAERAE REGDYGKVAE IRYGKIKEAQ ERLEKLQQNV
EAQKSGKSLI QEEVTSEDIA EVVAKWTGVP VTKMLQSDRE KLLRLEDELH KRVVGQQEAI
VAVSDAVRRS RAGLQDQKKP IGSFLFLGTT GVGKTELAKA LAEYLFDDES AMTRIDMSEY
QERHAVSRLV GAPPGYVGYD EGGQLTEAVR RKPYSVVLLD EIEKAHPDTF NILLQVLDEG
RLTDNKGRIA DFKNTIIIMT SNMGSGIIEE KFNAVKDIPT AIEAARTEVL GLLKQTVRPE
FINRIDDIVM FTPLNQDNIK EIVSLQLRQV TKMLGKQNIT LDATEEAISL LAKQGFDPQF
GARPVKRTIQ KEVLNELSKQ ILSGKVTTDS IILIDAFDDE LVFRNQSDLV EDL
|
|---|
| |