| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09188 |
|---|
| Symbol | |
|---|
| ID | 9297321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2009677 |
|---|
| End bp | 2010600 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | putative outermembrane protein |
|---|
| Protein accession | YP_003716583 |
|---|
| Protein GI | 298208404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.885938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG TATTAAAATT TAGATTCTGT ATTGGTTTAT TTTGTTTGGC AGCAATACCA
TTTACAAAAG CACAACAACT TAGTCCACTA AAAAATAAGG TGTATTACTC TGTAGAAGAT
GCATTAACTG AAAATTTACA AGCAAGACAA CTTAATTTAA GAGATCAGGA GTTATTACAC
ATCCCAAATA ATGTAGAATT ACTTGAACAA CTTCAGTTTT TAAACCTAAT GCGAAATGAT
ATCACATTTT GTTCTGAAGC ATTATTTAAC CTATCTAATT TAGAAACGCT TAACCTTAAG
TTAAATGGGA TAACAGTATT ACCGGACAAC ATAGGTAATC TTAAAAAGTT AATTCATTTA
AATATTTCGG CAAATAAATT AAAATCACTG CCTAATACAA TTGGTAACCT TAAAGACTTG
AAGGTGCTTT ACCTTTCTTT AAACGCTTTA ACTACGCTTC CTACAAGCAT AGGACAATGT
AAAAACCTTA CAGATTTAGA TTTACAGAAC AACCATATTA GCTACCTTCC AAGTAGTTTT
AAAGAGTTAC AAAATTTGAA ACTACTAGAC TTGTCTCATA ACCAACTTTA TGAATTAGAT
AATTCTTGGA TAGCATCAGC TCAACTTGAA CGGCTTAATT TAGAAGATAA TGTATTAAAC
TGGCTACCAG AATCATTTGG AAATTTAACA GGTTTAAAGA CACTTAATTT GTCTAATAAT
CAATTAAAAG TCTTACCAGA ATCTTTAGTA CACTGTGAAC AGCTTGAGCT TTTAATACTA
TCAAACAATA AACTTACACA CTTGCCTAAA CACCTTAACA GGTTAAAATC TCTTTCAACA
CTTACTGCGT TACACAATAA TTTTTCTGAA AAAGAAAAGC AGCGCATTAA GAATGCACTG
CCTAACTGTA ATGTTTATTT TTAA
|
|---|
| Protein sequence | MFKVLKFRFC IGLFCLAAIP FTKAQQLSPL KNKVYYSVED ALTENLQARQ LNLRDQELLH
IPNNVELLEQ LQFLNLMRND ITFCSEALFN LSNLETLNLK LNGITVLPDN IGNLKKLIHL
NISANKLKSL PNTIGNLKDL KVLYLSLNAL TTLPTSIGQC KNLTDLDLQN NHISYLPSSF
KELQNLKLLD LSHNQLYELD NSWIASAQLE RLNLEDNVLN WLPESFGNLT GLKTLNLSNN
QLKVLPESLV HCEQLELLIL SNNKLTHLPK HLNRLKSLST LTALHNNFSE KEKQRIKNAL
PNCNVYF
|
|---|
| |