| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09136 |
|---|
| Symbol | |
|---|
| ID | 9297312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2002952 |
|---|
| End bp | 2003392 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | putative RNA polymerase sigma factor protein |
|---|
| Protein accession | YP_003716574 |
|---|
| Protein GI | 298208395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0643541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATT CTCATGATGC CGAAGAAGCT ATGCAAGAAG GTTTCATTAA TGCATTCACA
AAACTGCATC AATTTACAGG AGAAGTAACA TTTGGCGCTT GGCTTAAACG TATTGTAATT
AATAAGTGCC TTGATATGAT TAAGGCACGA AAACTTGAAA CTGTCGCTAT TAACGAGCAA
ATCTTATCTG TTGTAGAAGA TGATGATTCG GGTTGGCATG TTGCAGATCA CGTAACCTTA
GATCATGTTA AAGCTGCTAT AGATGAGCTG CCAGAGCGTT ATAAATACGC TGTGCAATTA
TTTTTGGTAG AAGGATATGA TCACGAAGAG GTTTCAGAAA TATTAAATAT TACACCAGTA
GCATCTAGAA CCCTAGTACA TAGAGGTAAA AAGAAGCTTC AAGATTTATT AAAAGACATC
TATGATGGCA CAGGATATTA G
|
|---|
| Protein sequence | MKNSHDAEEA MQEGFINAFT KLHQFTGEVT FGAWLKRIVI NKCLDMIKAR KLETVAINEQ
ILSVVEDDDS GWHVADHVTL DHVKAAIDEL PERYKYAVQL FLVEGYDHEE VSEILNITPV
ASRTLVHRGK KKLQDLLKDI YDGTGY
|
|---|
| |