| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09061 |
|---|
| Symbol | |
|---|
| ID | 9297297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1987980 |
|---|
| End bp | 1989596 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, peptide-binding protein |
|---|
| Protein accession | YP_003716559 |
|---|
| Protein GI | 298208380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.593779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAACA TCAAATACGT TTCAGTATTT TTATCAGTAT CAATTAGTTG CTTATTTCTT
ACTGCTTGTA AGGAGCAAGA TTCCGAAAAT AAAGACCATT TAGTCTTTAG GTATAATGAA
CATGCAAATA TTACATCTTT AGACCCAGCA TTTGCAAAAG ACCAGCGCAA TATTTGGGCT
TGCCACCAAT TATTTAATAG TTTGGTTGCT TTAGACGATT CTCTAAATGT TACACCAGAT
ATAGCGAAAT ATTGGACGGT AAGCGATGAC GCCCTAACAT ATACATTTAC TTTAAGAAAT
GATGTTTACT TTCATAAAGA TGAAAGGTTT GGCAAAGATT CCACAAGAAC TGTAAAAGCA
GAAGATGTTA CCTATAGTTT AAAACGTTTA CTGGATAATA GCATTGCCTC ACCAGGACGA
TTTGTTATGC AAAATGTAGC GCAAATGTCT ACTCCAAACG ACACAACTGT TATCCTGAGA
TTACAAAAGC CTTTTCCAGC TTTTTTAGGC TTACTTTCTA CAAAGTATTG TTCTGTTTTG
CCTAAAGACA TTGTTGAAGC CGATACCAAT TTTAGATCTC ATCCTATTGG CACAGGTCCT
TTTAAGTTTA AGCGTTGGGA AGAAAATGAA AAATTAGTAT TTAGAAAGAA TAATTTATTT
TATCAAAAAG ATAGCCTAGG TAACCAACTG CCATATTTAG AAGCTGTTGC CATAACGTTT
TTACCAGATA AACAGAGTGA GTTTCTTCAG TTTGCACAAG GAAATATAGA TTTATTAAAC
GCTTTAGATC CTTCCTATAA AGATGAATTA CTTTCTGGTA ACGGAACTCT TAAAAATGCT
TATAAAAACG AAGTTAATAT ACTTACTGAG CCATTTTTAA ATACTGAATA TCTAGGTATT
TATTTAGACT CTGAAACCTC TGAAATTTCA AATTTAAATC TTAGGAAAGC TATTAATTTT
GGCTTTGACA GGCACGCCAT GATTACTTAC TTAAGAAATG GAATTGGAAC GCCAGCCGAA
CAAGGGTTTA TCCCAAAAGG ATTGCCTGGT TTTTCAAAAC AACGTTATTA CTCCTACCAA
CCAGAAAAGG CGAAAGCCTT TGTAGAAGCT TATAAAGCAG AAACCGGAAA CCAAAACCCT
GAAATAACAA TATCTACAAA TGCAAATTAT TTAGATTTAG TAGAGTATAT ACAGCGTGAA
TTAGGTAAAA CAGATCTTAA AGTAAATGTA GATGTTATGC CGCCTAGCAC TATTAGGCAA
CAACGCAGTG CAGGAAAATT AGATGTATTT AGAGCCAGTT GGATTGCAGA TTATCCCGAT
GCAGAAAATT ACCTTTCTTT ATTTTACAGT AAAAACCACT CGCCTAACGG ACCTAATTAT
ACGCATTATA AGAATGAAAG TTTTGATCTT TTGTTTGAAA AAGCCCTTAT TACCTCTAAG
ACTGAAGAAC GTATTAAAAT GTACAGCAAA CTTGATTCCC TAGTAATGTC TCAAGCGCCC
ATTGTACCTT TATATTATGA TGAAGTTGTA AGATTTACCC GTAAGAATAT TTCTGGTATG
CAGATAAATG CACTAAACCT TTTAGATTTA AGAACAGTAA GAAAAACTAT TAAATGA
|
|---|
| Protein sequence | MKNIKYVSVF LSVSISCLFL TACKEQDSEN KDHLVFRYNE HANITSLDPA FAKDQRNIWA
CHQLFNSLVA LDDSLNVTPD IAKYWTVSDD ALTYTFTLRN DVYFHKDERF GKDSTRTVKA
EDVTYSLKRL LDNSIASPGR FVMQNVAQMS TPNDTTVILR LQKPFPAFLG LLSTKYCSVL
PKDIVEADTN FRSHPIGTGP FKFKRWEENE KLVFRKNNLF YQKDSLGNQL PYLEAVAITF
LPDKQSEFLQ FAQGNIDLLN ALDPSYKDEL LSGNGTLKNA YKNEVNILTE PFLNTEYLGI
YLDSETSEIS NLNLRKAINF GFDRHAMITY LRNGIGTPAE QGFIPKGLPG FSKQRYYSYQ
PEKAKAFVEA YKAETGNQNP EITISTNANY LDLVEYIQRE LGKTDLKVNV DVMPPSTIRQ
QRSAGKLDVF RASWIADYPD AENYLSLFYS KNHSPNGPNY THYKNESFDL LFEKALITSK
TEERIKMYSK LDSLVMSQAP IVPLYYDEVV RFTRKNISGM QINALNLLDL RTVRKTIK
|
|---|
| |