Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_08686 |
Symbol | |
ID | 9297221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 1898226 |
End bp | 1899182 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_003716484 |
Protein GI | 298208305 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT TAGCAAATGA TGGTGTTTCT CAAAGCGGTG TAGACGCTAT GGAAAAAGCT GGTTTTGAAG TTATAACTAC TAACGTAGCT CAAGATCAAC TTAAAGACTA TATAAATAAA AACGACATTT CTGTACTATT GGTAAGAAGT GCCACAACTG TAAGAAAAGA ATTAATCGAT GCGTGCCCTA GCTTAAAAAT AATAGGTCGT GGCGGTGTTG GTATGGATAA TATAGATGTT AGCTATGCAA AAGAAAAAGG CTTGCACGTT ATTAATACAC CTGCAGCATC ATCCAGTAGC GTTGCAGAGC TCGTATTTGC TCACCTATAT GGTGGCGTTA GATACTTGTA CGACTCTAAT AGAGCAATGC CACTAGAAGG CGATACAAAT TTTAAGGCTT TAAAAAAATC TTATGCTAAA GGAAGAGAAC TAAGAGGTAA AACCATAGGT ATTATTGGTT TTGGTCGTAT TGGTCGTGAG GTAGCTAAGA TTGCCTTAGG TATCGGTATG AAAGTAGTAG CAAGTGATAA CTATGTAGGT GAAGCAGAAA TAGAATTAGA ATTTTACAAT CACCAAACCA TAAAGATTCC TATTAAAACA GAACCCGTTT CAGATTTAAT ACAGCATTCA GATTTTATAA CCTTACACGT TCCTGCTCAA AAGGATTATG TAATTGGTAA AGAAGAAATT TCAAAAATGA AAGAAGGTGT TGGTATTATT AATGCTGCAC GTGGTGGTGT ATTAGATGAA GTGGCATTGG TTGATGCTCT AAATGATGGA AAAGTATCTT TTGCAGCTTT AGATGTTTTT GAAAAAGAGC CTAAGCCAGA GATACAGTTA TTAATGAATG AAAAACTTTC ATTAAGTCCT CATATTGGCG CAGCTACTCT AGAAGCGCAA GACAGAATTG GTGTTGAGTT AGCAGAGCAG ATTGCAGATA TACTACAACC TGCATAA
|
Protein sequence | MKILANDGVS QSGVDAMEKA GFEVITTNVA QDQLKDYINK NDISVLLVRS ATTVRKELID ACPSLKIIGR GGVGMDNIDV SYAKEKGLHV INTPAASSSS VAELVFAHLY GGVRYLYDSN RAMPLEGDTN FKALKKSYAK GRELRGKTIG IIGFGRIGRE VAKIALGIGM KVVASDNYVG EAEIELEFYN HQTIKIPIKT EPVSDLIQHS DFITLHVPAQ KDYVIGKEEI SKMKEGVGII NAARGGVLDE VALVDALNDG KVSFAALDVF EKEPKPEIQL LMNEKLSLSP HIGAATLEAQ DRIGVELAEQ IADILQPA
|
| |