| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_08476 |
|---|
| Symbol | |
|---|
| ID | 9297179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1855581 |
|---|
| End bp | 1857449 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | YP_003716442 |
|---|
| Protein GI | 298208263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AAAAATTTGA CCTTAACTCA TTAATCGGTT TTATATTAAT TGGTGGTATT
CTTATTTGGA TGCTTTATAG AAATGCACCA ACCGAAGAAG AACTTCAAGA AAAAGCAACT
ACAGAGCAAG TTGAAAAAGC AAACGAGACT AATGAAGTTG CTACACCAAC TACTGTTGAC
TCTACTCAGG TAGCCACTAC AGAAACAGAC TCTATAAAAC AAGCTAGGGC TAATGCACAA
TTAGGATCAT TCGGTTATTC AAACCAATAT GATAATGGCA CAGTAACAAC ATTTGAAAAT
GACGTTTTGT TTTTAAAGGT TGCAAACAAA GGAGGTCAAA TAGTTGAGGC TAAAATGAAG
AATTTTAAAA CCTACGACTC TATTCCTGTT CATCTTATAA AAGATAACAA CGCATCTTTC
AATATTAATT TTAAAACGTC TGACAACCGC ACTTTAAATA CTGAAAACTT AGCATTTGAG
CCTACTTTAT CTAAAAGTGG TGACAACCAA GTTTTAAGTA TGAAGCTTAA GGTTTCAAAT
TCTGAGTATC TAGAATACCG TTATGAGCTT AAGCCAGGTG AGTATATGTT AGATTTTTCT
ATAAACTCTA AAGGCTTAGA AAATGTATTA AATACATCTG AAGCTGCTGT GCTTAACTGG
AAATTAAAAG GTTATAGGCA CGCTAAGAGT ATTTCATATG AAAACAGATA TACAGAGGCT
ATATATGAGT ATGAAGATGG TAAAGATGAT TACTTAGGAC AGCAAGATTT TACAGATGAT
GAAGAGGAAG ATGTTACTTA TGTAGCATTT AAACAACACT TCTTTACTTC AATCTTACTT
ACGGATACGC CTTTTAAAAC AGGTAAGTTT ACGTCTAAAA ATTTGGTTGA AGATGAAGAT
ATAGATACAG TTTACACAAA GGAATTTACA GCACAGTTTC CATTAGAAAC TAAAGGTGGT
GAAATAGATT ATAATATGAA TTGGTACTAC GGTCCTTCAG ATTATAAAAT CTTAAATGAT
TATGATAGGA ACCTTGATGA GGTTATTCCA TTAGGTTGGG GAATTTTTGG ATGGATAAAC
CGTTATGTAT TTATACCATT CTTTGCATTT ATTACAAGTT TTGGAGTTGT ATCTTATGGT
GTGGCAATTA TAATTATGAC AATTGTTGTA AGAATAGTGC TGTCTCCAGT TACTTATAAA
TCTTACTTGT CTCAAGCTAA GATGAAAGTT CTTAAGCCAG AAATAAATGA GCTTAATGAA
AAGTATAAGG ACAACCCAAT GAAAAAGCAG CAAGAAACAA TGAAGCTGTA TAGTAAGGCA
GGCGCAAGCC CAATGAGTGG TTGTTTACCG GCACTTATGC AATTGCCTGT ATTCTATGCA
TTGTTTCAGT TTTTCCCAAG TGCATTTCAA CTAAGGCAGA AAAGTTTCCT TTGGGCAGAT
GATTTGTCAA GTTATGATAC TATTGCAGAG TTACCTTTTA GCATTCCATT TTATGGCGAC
CACGTGAGTT TGTTCCCAAT ATTAGCATCT GTCGCTATCT TCTTTTATAT GACGATGACT
ACTGGGCAAA CTATGCAGCA AAACTCTCAG CCAGGAATGC CTAACATGAA GTTTATCATG
TACTTGTCGC CATTATTAAT GTTGTTCTTC TTTAATAACT ACGCGAGTGG TTTATCATTA
TATTACTTTA TCTCTAACCT TATTACAATT GGTATTATGT TAGTTATTAA GAATGTAATT
ATAGATGAAG ATAAGATTCA CGCTAAGATA GAAGCAAACA AGAAGAAGCC TAAAAAACAA
AACAGATTTT CTAAGAAAAT GCAGGAAATG ATGGAACAGG CAGAAGCTCA GAAAAATGCA
AAAAAATAG
|
|---|
| Protein sequence | MENKKFDLNS LIGFILIGGI LIWMLYRNAP TEEELQEKAT TEQVEKANET NEVATPTTVD
STQVATTETD SIKQARANAQ LGSFGYSNQY DNGTVTTFEN DVLFLKVANK GGQIVEAKMK
NFKTYDSIPV HLIKDNNASF NINFKTSDNR TLNTENLAFE PTLSKSGDNQ VLSMKLKVSN
SEYLEYRYEL KPGEYMLDFS INSKGLENVL NTSEAAVLNW KLKGYRHAKS ISYENRYTEA
IYEYEDGKDD YLGQQDFTDD EEEDVTYVAF KQHFFTSILL TDTPFKTGKF TSKNLVEDED
IDTVYTKEFT AQFPLETKGG EIDYNMNWYY GPSDYKILND YDRNLDEVIP LGWGIFGWIN
RYVFIPFFAF ITSFGVVSYG VAIIIMTIVV RIVLSPVTYK SYLSQAKMKV LKPEINELNE
KYKDNPMKKQ QETMKLYSKA GASPMSGCLP ALMQLPVFYA LFQFFPSAFQ LRQKSFLWAD
DLSSYDTIAE LPFSIPFYGD HVSLFPILAS VAIFFYMTMT TGQTMQQNSQ PGMPNMKFIM
YLSPLLMLFF FNNYASGLSL YYFISNLITI GIMLVIKNVI IDEDKIHAKI EANKKKPKKQ
NRFSKKMQEM MEQAEAQKNA KK
|
|---|
| |