Gene CA2559_08366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_08366 
Symbol 
ID9297157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand- 
Start bp1834878 
End bp1835606 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content33% 
IMG OID 
ProductABC transporter, permease protein 
Protein accessionYP_003716420 
Protein GI298208241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00446835 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCCA TCTTAAAAAA AGACATACAA ACCTTTTTCT CAAGTACCAT AGGGTATTTG 
GTCATTGCTG TTTTCCTAAT AGTTAATGGA TTATTTCTTT GGGTGTTCCA AGGTGACTTT 
AATGTCTTTA ATTATGGGTT CGCTGAGTTG TCTTCTTACT TTAGGTTAGC ACCTTGGGTA 
TTACTCTTTC TTATTCCTGC TGTTACTATG AGAAGTATTG CTGAAGAGCG AAAACAAGGT 
ACATTAGAGT TATTACTCAC CAAGCCTATT AGCTCTATGC AACTTATTTT AGGGAAATAT 
TTTGGTGCAT TGTCATTAAT AGTAATTGCA ATACTACCAA CACTTGTTTA TGTCTGGACC 
ATATATGCAT TAGGTAATCC TACAGGTAAT TTAGATTTAG GTGTTATCCT TACATCATAT 
ATAGGTATGC TGTTATTAGC ATCTACATTT GTAGCTATTG GGTTATTTGC CTCAAGCGTA 
ACCCAAAACC AATTAGTGGC ATTTATAATT GCCGTTCTAA TATGTTTTTT AATGTTTTAT 
GGATTTGATG GGATTTCAAG CCAATTAATT AATGAGTCGT CTTTTAATCT TAGCTTTTTT 
GGATTACAAT ACCATTATGA TAGTTTAGGA AGAGGTGTCT TAGACACTCG TGATCTTATC 
TATTTTATAA GTATAACTGT TCTCTTTATA GCCTTAACGC ATTTCAATAT TAAACGCTAT 
ACTAATTAA
 
Protein sequence
MYAILKKDIQ TFFSSTIGYL VIAVFLIVNG LFLWVFQGDF NVFNYGFAEL SSYFRLAPWV 
LLFLIPAVTM RSIAEERKQG TLELLLTKPI SSMQLILGKY FGALSLIVIA ILPTLVYVWT 
IYALGNPTGN LDLGVILTSY IGMLLLASTF VAIGLFASSV TQNQLVAFII AVLICFLMFY 
GFDGISSQLI NESSFNLSFF GLQYHYDSLG RGVLDTRDLI YFISITVLFI ALTHFNIKRY 
TN