| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_08006 |
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| Symbol | |
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| ID | 9297085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | + |
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| Start bp | 1757677 |
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| End bp | 1758747 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_003716348 |
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| Protein GI | 298208169 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGA ACAGTAAACT TAGCCCTAAA GGGTTTGACA CATCAAACTC ATCAGAAGAT
AATGATGATG ACCTGTATGA ACACTATGCC TTTACAGCTA GCAAAGGACA GGAACCGTTA
CGAGTAGATA AATTTTTAAT GAATTTCATT GAAAATGCAA CACGTAATAA AATACAGAAA
GCAGCCAAAG AAGGTAATAT TTATGTAAAT GATGCTGTTG TAAAACAAAA CTACAAAGTA
AAAGCAGGCG ATGAGGTTAA GGTGTTATTT GAGCATCCGC CTTATGAAAT GTTGCTTACG
CCTGAAGATA TACCTTTAAA CATTGTTCAC GAAGATGACG ATGTACTGGT AGTTAATAAG
CCTGCCGGTA TGGTTGTTCA TCCTGGTCAT GGTAATTACT CAGGAACCTT AATAAATGCA
TTAGTTTTTC ACTTTGATAA CTTACCAAAT AATAGCAGTA ACCGTCCAGG TTTAGTGCAT
AGGATTGATA AAGATACAAG TGGTTTATTA GTTGTAGCTA AGACAGAACA TGCAATGACG
CATTTGTCTA AACAGTTTTT TAATAAGACA AGCTCTAGAG AATACATAGC CTTAGTATGG
GGAAATGTTG AAGATGATCA AGGTACTATA GAAGGTCATA TTGGAAGACA CCCTAAAAAT
AGATTACAGA ATACCGTATT TTTAGAAGAT GATGCCGATG AAAAAGGTAA GCCAGCCGTT
ACACATTATA AAGTGATAGA GCGTTTAGGG TACGTAACAT TATTATCTTG TAAATTAGAA
ACAGGACGCA CGCACCAAAT TCGTGTTCAT TTAAAACATA TTGGTCATAC TCTTTTTAAC
GATGAACGTT ATGGAGGTGA TAAAATCTTA AAAGGAACAC ACTTTAGTAA GTACAAACAG
TTTGTGGATA ATTGCTTTAA AACGTTACCA CGACAAGCCC TACACGCTAA AACTTTGGGG
TTTGAACATC CAGTGTCTGG CGAGTGGTTA AGTTTTGATT CTGAAATCCC AAAGGATATA
AGTGACTGTG TAGACAAGTG GCGTAATTAT GCCACACACG CTATGGACTA A
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| Protein sequence | MTQNSKLSPK GFDTSNSSED NDDDLYEHYA FTASKGQEPL RVDKFLMNFI ENATRNKIQK
AAKEGNIYVN DAVVKQNYKV KAGDEVKVLF EHPPYEMLLT PEDIPLNIVH EDDDVLVVNK
PAGMVVHPGH GNYSGTLINA LVFHFDNLPN NSSNRPGLVH RIDKDTSGLL VVAKTEHAMT
HLSKQFFNKT SSREYIALVW GNVEDDQGTI EGHIGRHPKN RLQNTVFLED DADEKGKPAV
THYKVIERLG YVTLLSCKLE TGRTHQIRVH LKHIGHTLFN DERYGGDKIL KGTHFSKYKQ
FVDNCFKTLP RQALHAKTLG FEHPVSGEWL SFDSEIPKDI SDCVDKWRNY ATHAMD
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