Gene CA2559_07866 details

Gene Information

• Locus tag: CA2559_07866
• ID: 9297057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 1731211
• End bp: 1731786
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 31%
• Product: RNA polymerase ECF-type sigma factor
• Protein accession: YP_003716320
• Protein GI: 298208141

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGACTAG CACACACAGA TATTGAAGCG TTAATTACTC TGGCAAAAAC CGGTAAACAA 
TCTGCCTACA AAAAATTATT AGATGAGTAT TGGTCTTATA TCTATGGGTT TCAGCTAAAA 
AGAACCTCAG ATGAATTTTT AGCAGAAGAT ATTACCATAC AAACCTTTGC CAAAGCATTT 
GATAAGTTGA GTACATACAA CTCAGACTAT AAGTTTAAAA CCTGGCTTAC TACTATCTCT 
AAGAATATTC ATGTTGATAT TATTAGAAAG GAAAATAACG CAGTTGTAAC AAATACATCT 
AAAGCAGAAA ATAAAAAGAT TAACAGCTTG GCAGACAACA CACTTTCTGC AGAAGATGAA 
CTTATTAAAG AGCAAAACCT TAGCTTATTA CTACAAAATA TAAAGAAGCT TAAACCAGAC 
TATCAAAATA TTATAATGCT AAGATATTTT CAAGAGTTAA GCTATAAAGA AATTGCTGAA 
ACTATTGATG AACCCATAAA TACAATTAAG GTTAAATTAC TTAGAGCACG TAAACTTCTA 
GCAGATATAA TTACTTCAGG AACTAACAAA GTCTAG 

 

Protein sequence

MGLAHTDIEA LITLAKTGKQ SAYKKLLDEY WSYIYGFQLK RTSDEFLAED ITIQTFAKAF 
DKLSTYNSDY KFKTWLTTIS KNIHVDIIRK ENNAVVTNTS KAENKKINSL ADNTLSAEDE 
LIKEQNLSLL LQNIKKLKPD YQNIIMLRYF QELSYKEIAE TIDEPINTIK VKLLRARKLL 
ADIITSGTNK V