| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_07781 |
|---|
| Symbol | |
|---|
| ID | 9297040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1715659 |
|---|
| End bp | 1717533 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003716303 |
|---|
| Protein GI | 298208124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTTAG AGCAAGAAAA GGCTCATAAA ACAAAGCGTT ATTTTTTATT GGCTAGCTTA
GTGTTGTCAT TTCTTGTTCC GCTAATCACT TTTACATCTT ATGAGTATGT TGAGCCAATC
TCAGATCCTA CCACACTTTT AACATTGGCA GATGGCGAGG ATGCTGCAGT TAATAAAGCT
AACACCTCTT TAAATATTAT TCTTGGTATT TACTGTTTAG GCGTAGCTGT TTATCTTATC
AGATTCTTAA TCAATTTAAA TAAAATAAGG GTAAGTATTT TACAACATAA CACTGTGAAG
AATAATATAT ATACAGCAGT GCTAGTACTT AAGAGAATTG TACCACACAG TTTCTTTAAT
TACATATTTA TTAATAAAGA TGCCTATACT ACTAATGCAA TACCTGCCGA GGTTTTTCAA
CATGAAGAGG CACACATAAA ACAAAAACAT TCTTTAGATC TCCTTTTTAT AGAAGTGCTT
CAGATTATAT TTTGGTTTAA CCCACTACTC TATTTCACTA AAAAAGCAAT AAAGCTAAAT
CACGAATTTT TAGCAGATGA AGCTGTTGTA AATCAACATA AAAACATTGA AACCTATCAA
CATTTACTCG TCAATTTTTC AAGCAACCCT CATCAGGTAG CATTGTCGAG CTCATTTAAT
TATTCATTAA CCAAAAAACG AATCCTTATG TTATCAAAAT CATCATCCAA ACTAAAATGG
CTTAGGCTAT TTGCTATTTT ACCCTTATTA GCTGGACTAC TGTTTAGTTT CAGCTCAAGA
GAAACAATTT ACAAAACGAT GCTTGTGCCA ACAGAAAATG TAGCCTCTAA CACAACAAAA
GTCATTACAA AGAACCTGTC TCAGGAGAAA CAGATTGTTT TAAGTGTAAA TGAAAACACT
ATTAAAATTA ATAACAAAGT AGTTGCTCTA GAAAACGTTA CAGACGAGAT AAATAAAATT
ACTAAAGGTT GGAGCAAGCA AGAATTAATT GATCCTAATA TAAAGGTGAG CTTTAAGAAC
GTGCCTAAAA ATGGTATTGC AAACATTGAG CTTGCATTTA AAGCTTCGCG TCTTGGTAAG
GCAAACCCAA AGAAGAGTTT CATTTTACCG CCACCGCCAC CGCCACCAGC ACCACCTAAG
CAAGCAACTA AAGAACTTGT ACCACCACCG CCACCGCCAC CATTAAGCCC AACACAAACT
TCTGGTCAGG TAGAAATTAA TGGTAAGGAG CACTATTTTG TAAAAGATGG TGAAAGCATA
AGATATTTTA ATCGTTTTGC GGGTGAAGTA GATAAAGAAG GAACACCTCT AGATCCAGAA
ATGACTGAAG AACGTATAAA AGCCTTAGAA AAATTACACG AGGAACGCCA AAAGCTTTCT
AAGGAGGAAA AGCACTTAAA AAAGTCTGAA AAAAGGTTGA AAAAATTTGA GGCTAAGGTT
GAAGATCACG AGAAGAAAAG AGCAGAATTA CTAAAAGAAA AGTCTGAAAA ACAACGTGAA
GCTTATGAAA AAGCTATGGT AAAAAGAGCT GAAGCTATAG AAAAACGTAG TAAAAAACTT
GAAGACCGTA AAGAATATAT AACTAAGCGT TACAAAGACA ATAAGGTTGT AGAGGTTTAT
GATGTCTCAG AAGCCGATGA GATGCCACCT ATACCACCTT TACCTCCTAC ACCACCAACG
TCAACACCAA CAGAGATTAT TAAAAACATG TCTAAAGCTG GTGCTACGTT TTACTTAGAA
GAAAAGGAAA TTACACCTAA AGAAGCATTA GAGATTGTAG CAAAAGACAA AGACATAAAT
ATGCTTGCTA ACCCTAACGC TAAACATGGT AAGTATGTAA AGCTTTCAAA AGCACCTATT
TCTATTAGTA ATTAA
|
|---|
| Protein sequence | MVLEQEKAHK TKRYFLLASL VLSFLVPLIT FTSYEYVEPI SDPTTLLTLA DGEDAAVNKA
NTSLNIILGI YCLGVAVYLI RFLINLNKIR VSILQHNTVK NNIYTAVLVL KRIVPHSFFN
YIFINKDAYT TNAIPAEVFQ HEEAHIKQKH SLDLLFIEVL QIIFWFNPLL YFTKKAIKLN
HEFLADEAVV NQHKNIETYQ HLLVNFSSNP HQVALSSSFN YSLTKKRILM LSKSSSKLKW
LRLFAILPLL AGLLFSFSSR ETIYKTMLVP TENVASNTTK VITKNLSQEK QIVLSVNENT
IKINNKVVAL ENVTDEINKI TKGWSKQELI DPNIKVSFKN VPKNGIANIE LAFKASRLGK
ANPKKSFILP PPPPPPAPPK QATKELVPPP PPPPLSPTQT SGQVEINGKE HYFVKDGESI
RYFNRFAGEV DKEGTPLDPE MTEERIKALE KLHEERQKLS KEEKHLKKSE KRLKKFEAKV
EDHEKKRAEL LKEKSEKQRE AYEKAMVKRA EAIEKRSKKL EDRKEYITKR YKDNKVVEVY
DVSEADEMPP IPPLPPTPPT STPTEIIKNM SKAGATFYLE EKEITPKEAL EIVAKDKDIN
MLANPNAKHG KYVKLSKAPI SISN
|
|---|
| |