Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_07075 |
Symbol | |
ID | 9296911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | + |
Start bp | 1575849 |
End bp | 1576592 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | rhomboid family protein |
Protein accession | YP_003716174 |
Protein GI | 298207995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGAAGAA TAACCGAAAC CGTTAAAGTT CTTATTATAA TAAATGTCCT GTTTTTTGCA GGAACTTTAT TTTTAGGAGA TAGAGCTTAT CAATTACTTT CTTTATACTT TATTAAGAAC GAAAACTTTC AGCTGTGGCA GATTGTAAGC CATATGTTTA TGCATGGTGG TGTTATGCAT ATTTTATTTA ATATGTATGC ACTTTGGGCA TTTGGTAGTC CTATTGAAAA TTATTTAGGG AAAAATAAAT TTATCTTTTT TTATTTTTCA GCAGGTATAG GAGCAGCAAT AATTCACACG TTGGTTAATT ATTTTGCATA TCAATCTGGC TTTAATTCTT TATTAGACGC AGGAATGACA CCAGAAGCCA TACAGACTAT GCTTAATACA GGACAGTATG ATACTAGTAT TTTAAATAAT GTATCAAAAG ACACACTCCA AACTATGTTT GAAGCCTTTA ATACGCCAGC TGTAGGGGCT TCTGGAGCTA TTTATGGGGT ATTGGTTGCA TTTGCAATGT TATTTCCTAA TGTATCATTA TTCTTATTAT TTGTACCGGT ACCAATAAAA GCTAAATATT TTATACCCGT TTTAATAGGA ATAGATTTGT TTTCTGGATT TACCGGTTAC TCATTGTTTG GTGGAGGTAT TGCTCACTTT GCCCACGTTG GTGGTGCCCT TTTTGGCTTT ATCATGATGT GGTATTGGAA AAAGAATTCG TTTAACCAAA ACCGTTGGGA TTAA
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Protein sequence | MGRITETVKV LIIINVLFFA GTLFLGDRAY QLLSLYFIKN ENFQLWQIVS HMFMHGGVMH ILFNMYALWA FGSPIENYLG KNKFIFFYFS AGIGAAIIHT LVNYFAYQSG FNSLLDAGMT PEAIQTMLNT GQYDTSILNN VSKDTLQTMF EAFNTPAVGA SGAIYGVLVA FAMLFPNVSL FLLFVPVPIK AKYFIPVLIG IDLFSGFTGY SLFGGGIAHF AHVGGALFGF IMMWYWKKNS FNQNRWD
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