Gene CA2559_06615 details

Gene Information

• Locus tag: CA2559_06615
• ID: 9296818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 1472310
• End bp: 1472873
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 34%
• Product: putative RNA polymerase ECF-type sigma factor
• Protein accession: YP_003716082
• Protein GI: 298207903

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCA TTACACTGTT TAAAAATGAA ACACAACTTA TAGAAAAAGC GATGCGCAAT 
CATCGTGGTG CTCAAAAACA CCTGTATGAG AAGCACGCTC CTAAAATGCT TAGTGTTTGC 
AGACAGTACA TTAAAGACTT ACAATTTGCA GAAGATGTGA TGTTAAAAGG ATTTTTTAAG 
GTGTTTAACA ACTTAAGCAG TTTTAAAAAT GAAGGCAGTT TTGAAGGTTG GATAAGAAAG 
ATTATGGTGC GTGAAGCAAT TTCTTTTTTA AGAAAGCAAG ACAAGTTAAA GTTTTCTGAG 
GATATGAGTA CAGAGTCTCA AAATAGTATA GATCCTATTG AAAGCGATTT GCATGTTACC 
CACATTCAAA GTATGATAGA CCAGCTACCA GAAGGTTACA AAGCCGTTTT TATTCTTTAT 
GCTGTTGAAG GTTACAAACA TCAAGAGATA GCAGAATTAC TAAAAATTAG CCAAGGGACA 
TCAAAATCAC AATTGTTTAA AGCACGAAAA ATGCTTCAAG AACAATTAAA CACTACAAAA 
CAGACCAGTT ATGGCACCAA TTAA 

 

Protein sequence

MKVITLFKNE TQLIEKAMRN HRGAQKHLYE KHAPKMLSVC RQYIKDLQFA EDVMLKGFFK 
VFNNLSSFKN EGSFEGWIRK IMVREAISFL RKQDKLKFSE DMSTESQNSI DPIESDLHVT 
HIQSMIDQLP EGYKAVFILY AVEGYKHQEI AELLKISQGT SKSQLFKARK MLQEQLNTTK 
QTSYGTN