| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_06525 |
|---|
| Symbol | |
|---|
| ID | 9296800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1453726 |
|---|
| End bp | 1454913 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane rod-shape determining protein |
|---|
| Protein accession | YP_003716064 |
|---|
| Protein GI | 298207885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TTTTTCAAAA TCTTAAAGGT GATAAGTTCA TCTGGGCTAT AGTCGGGTTA
TTAGCGATAT TTTCGTTTAT ACCTGTATAT AGTGCTAGTA GCAACTTGGC ATACCTACAA
GGTGATGGTA GTACGTTTAA GTATTTATTA AAGCACGGCG CTCACCTTTT CTTAGGTTTC
ATCTTGCTGT ACGTTATACA TAAGGTGCCT TATCGATTTT TTAGAGGCTT ATCTATCATA
ATGATTCCGG TAGTTATACT GCTCTTGTTA TACACAATGG CGCAAGGCAC AACTATAGAT
GGTGCTAATG CTAGTAGATG GATTAATGTT GGAGGTTTAA GTTTTCAAAC ATCAACGTTA
GCATCGGTGG TTTTAATGGT TTACGTTGCA AGGTATTTAT CTAAAATACA CAACAAAGCC
ATAACATTTA AAGAAACCCT TTTACCGCTT TGGTTACCTG TATTTGTAAT CTTGGCCTTA
ATTCTTCCTG CTAACTTTTC AACTACTGCT ATTGTTTTTG CAATGGTTGT AGTACTTGTT
TTTTTAGGTG GTTATCCTTT AAAATATTTA GGTGTCATTT TAGGAATAGG ACTAGTAATG
TTAACCATAT TTATCTTATC TGCAAAAGCA TTTCCAGGAG TTTTCCCTAA CCGTGTAGAT
ACGTGGATAA GTAGAGTTGA AAACTTTACA AGTGATGATG ATACAGATGC TTATCAAATA
GAAAAAGCAA AAATTGCAAT TGCAACAGGT GGCATTACAG GAACAGGTGC AGGAAAGAGT
GTACAGCGAA ACTTTTTACC TCAATCCTCA TCAGATTTTA TATATGCAAT TATAGTTGAA
GAACTTGGAT TAATAGGAGC CTTTGGAGTA ATGATTGCAT ACCTATTGTT ACTGTTTAGA
TTAACTATAG TCGCAACAAA AGCAGACTCA GTTTTCGGAA AATTAGTAGT TATAGGTGTT
GGTTTACCTA TTATTTTTCA AGCACTAATA AATATGGCAG TAGCGGTTGA GCTATTTCCA
GTAACAGGAC AAACCTTGCC ACTAATTAGT AGTGGTGGAA CATCTATTTG GATGACGTGT
TTATCCTTAG GAATAATATT GAGTGTAAGT GCTAAACGTG AAGCCATTAA ACAAATGGAA
AGCGAAGAAA GTGATAACCC ATTAGACATT TTAAGCGAAG CAATATGA
|
|---|
| Protein sequence | MKRIFQNLKG DKFIWAIVGL LAIFSFIPVY SASSNLAYLQ GDGSTFKYLL KHGAHLFLGF
ILLYVIHKVP YRFFRGLSII MIPVVILLLL YTMAQGTTID GANASRWINV GGLSFQTSTL
ASVVLMVYVA RYLSKIHNKA ITFKETLLPL WLPVFVILAL ILPANFSTTA IVFAMVVVLV
FLGGYPLKYL GVILGIGLVM LTIFILSAKA FPGVFPNRVD TWISRVENFT SDDDTDAYQI
EKAKIAIATG GITGTGAGKS VQRNFLPQSS SDFIYAIIVE ELGLIGAFGV MIAYLLLLFR
LTIVATKADS VFGKLVVIGV GLPIIFQALI NMAVAVELFP VTGQTLPLIS SGGTSIWMTC
LSLGIILSVS AKREAIKQME SEESDNPLDI LSEAI
|
|---|
| |