Gene CA2559_06270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_06270 
Symbol 
ID9296750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1408948 
End bp1410141 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content38% 
IMG OID 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003716016 
Protein GI298207837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGAT TTGAAGTTTT TGGAGAAGAA GAACGCAAAC ATGTTCAAGA TGTATTAGAC 
AGCGGTATTC TTATGCGCTA TGGTTTTGAT GGTATGCGTA ACGGCCATTA TAAAGCCCAA
GAATTTGAGC AAAAGTTTGC AAAGCTTATG GGTGCAGAAT TTTGCCAGAT GACCTCTAGC
GGTACGTCTG CATTAACAGT TGCCTTGGCT AGCGCTGGTA TTGGTGCTGG AGATGAAGTT
ATCATACCTA CGTTTACTTT TGTTGCCACT TTTGAATCTA TAATTGCTTT AGGTGCTGTG
CCTGTTCTTT GTGACATAGA CGATACGCTT TGTTTAAATC CAGAAGCTGT AAAACAAAAA
ATTACCCAAA ATACGCGTGT CATAATGCCT GTACATATGT GTGGCTCTAT GGCAGACTTA
AATCCACTTA AAACAATTTG CGAGGAGAAC AACCTCATCT TACTCGAAGA TGCTTGCCAA
GCAATTGGCG GCACATACAA TGGCAAACAA TTAGGAACAA TAGGAGACTT AGGCTGTTTT
TCTTTCGACT TTGTAAAAAC TATTACTTGT GGTGAAGGTG GCGCTGTGGT AACCAACTCT
AGAAGCTATG CTGAAAATGC AGACAAGTAT CAAGATCACG GTCACGACCA CGTAGGGAAT
GATCGCGGAG CAGAAACGCA TCCGTTTTTA GGATACAATT ACCGTATTTC AGAACTTCAT
GCTGCAGTAG GCTTAGGCCA ATTAGAAAAA TTTGAAGATG TACTTAAAAA ACAAAAACAG
TATTATACAA TCTTAAGAGA AGAACTACGT AGTATTCCAG AAGTAACATT TAGACGCGTA
CCTCAAGATG GTAAAGAAAG TCACGCTTTT TTAAACTTTT TCTTACCAGA CGAAGACACT
ACCAGAAAAG CCCATAAAGC AATCTCTAAT GCTGGCGTAG ATGCCTGTTT TTATTGGTTT
GATAACAATT GGCATTATTA TAAAAAATGG GAACACTTAA CAGAACAAAA ATCTTTAGGA
AGATTACCAT CTGATGTAAG AGCTAATTTA CAAGATTTTA AAACCACAGA CTTTTCTGCA
AGTGATGCCT GGATGAGTAG AACAATTTCA TCTTTAATTA AAGTAGGCTG GACCGAAGAT
GAAATGAAAC ATCGAGCACA ACAACTAAAG CAAGCAATTT TATCTGTATT ATAA
 
Protein sequence
MPGFEVFGEE ERKHVQDVLD SGILMRYGFD GMRNGHYKAQ EFEQKFAKLM GAEFCQMTSS 
GTSALTVALA SAGIGAGDEV IIPTFTFVAT FESIIALGAV PVLCDIDDTL CLNPEAVKQK
ITQNTRVIMP VHMCGSMADL NPLKTICEEN NLILLEDACQ AIGGTYNGKQ LGTIGDLGCF
SFDFVKTITC GEGGAVVTNS RSYAENADKY QDHGHDHVGN DRGAETHPFL GYNYRISELH
AAVGLGQLEK FEDVLKKQKQ YYTILREELR SIPEVTFRRV PQDGKESHAF LNFFLPDEDT
TRKAHKAISN AGVDACFYWF DNNWHYYKKW EHLTEQKSLG RLPSDVRANL QDFKTTDFSA
SDAWMSRTIS SLIKVGWTED EMKHRAQQLK QAILSVL