| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_05850 |
|---|
| Symbol | |
|---|
| ID | 9296666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1311508 |
|---|
| End bp | 1312461 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | DNA-directed RNA polymerase alpha subunit |
|---|
| Protein accession | YP_003715932 |
|---|
| Protein GI | 298207753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT CAACCGATTT CGAAGGTAAA TTCGAATTTC GTCCGTTGGA GCCTGGTTAT
GGTTTAACAG TAGGTAATGC ACTAAGACGT GTATTATTAT CTTCTTTAGA AGGTTTCGCA
ATTTCTTCTG TACGTGTTGA AGGTGTAGAT CATGAATTTT CTACAATTTC AGGTGTTGTT
GAAGATGTAA CTGAAATCAT ATTAAATTTA AAACAAGTAC GTTTTAAAAG ACAAATTGAC
GAAGTAGACA ATGAAACTGT AACTATGAAT ATTTCTGGTC AAGAGCAGTT AACTGCTGGT
GATTTTCAGA AATTCATTTC AGGATTCCAA GTATTGAATC CAGATATGGT AATTTGTAAT
ATGGACAAAA AAGTGAACCT TAATATAGAA ATTACTATAG AAAAAGGACG CGGATATGTA
CCAGCAGAAG AAAACAAGAA AAGTAACGCA CCAATAGGTA CAATTTTCAC AGATTCTATC
TTTACACCTA TAAAAAATGT AAAGTATAGT ATTGAAAACT ACCGTGTTGA GCAAAAGACA
GATTACGAAA AGTTAGTTTT TGAAATCCAA ACAGATGGTT CAATCCATCC TAAAGATGCT
TTAACTGAAG CTGCTAAGAC TTTAATACAT CACTTTATGT TATTTAGTGA TGAGCGCATC
ACCTTAGAGG CAGATGAGAT TGCTCAAACT GAAACTTATG ATGAAGAGTC TTTACATATG
CGTCAGTTAT TAAAGACTAA GTTAGTAGAT ATGGATCTTT CTGTACGTGC ACTTAATTGC
CTTAAAGCTG CAGAAGTAGA TTCATTAGGA GACTTAGTTT CTTATAATAA GAACGATTTA
ATGAAGTTTA GAAACTTCGG TAAAAAGTCT TTAACAGAAT TAGAAGAACT TGTAAACAAC
AAGGGACTTA ATTTTGGAAT GGATCTTTCA AAATATAAAT TAGATAAAGA TTAG
|
|---|
| Protein sequence | MIDSTDFEGK FEFRPLEPGY GLTVGNALRR VLLSSLEGFA ISSVRVEGVD HEFSTISGVV
EDVTEIILNL KQVRFKRQID EVDNETVTMN ISGQEQLTAG DFQKFISGFQ VLNPDMVICN
MDKKVNLNIE ITIEKGRGYV PAEENKKSNA PIGTIFTDSI FTPIKNVKYS IENYRVEQKT
DYEKLVFEIQ TDGSIHPKDA LTEAAKTLIH HFMLFSDERI TLEADEIAQT ETYDEESLHM
RQLLKTKLVD MDLSVRALNC LKAAEVDSLG DLVSYNKNDL MKFRNFGKKS LTELEELVNN
KGLNFGMDLS KYKLDKD
|
|---|
| |