| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_05820 |
|---|
| Symbol | |
|---|
| ID | 9296660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1308194 |
|---|
| End bp | 1309537 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase SecY |
|---|
| Protein accession | YP_003715926 |
|---|
| Protein GI | 298207747 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA TCCAAACTTT AAAAAATATC TGGAAGATTG AGGAACTTAA AAACAGAATC
CTTGTAACAC TTGGTTTGTT ATTAGTTTAC CGTTTTGGTG CTCAAGTTGT TTTACCAGGT
ATTGATGCTG ATCAACTTGG TCAGTTTTCT GGAAATTTTG CAGGTGGCGG TATTGGAGGC
CTTTTAGATG CTTTTACTGG AGGTGCATTT TCTAATGCTT CAATTTTTGC ATTAGGTATT
ATGCCTTACA TTTCAGCATC TATTGTTGTA CAGTTAATGG GTATTGCTAT ACCTTACTTA
CAAAAGCTTC AAAAGGATGG AGAAAGCGGA AGACGTAAAA TTAATCAAAT TACAAGATGG
TTAACAATTG CAATATGTTT GGTGCAAGCA CCAGGTTATT TAGCAAGTTT ACCAGCATTA
GGTGTGCCAA CAGAAGCCTT TGTATTAGGA TTAACATTCC AATTTTACTT TACATCTGTT
ATTATCTTAG TTACAGGAAC AATATTTGCA ATGTGGCTAG GTGAAAAAAT TACAGATAAG
GGTATAGGAA ATGGTATATC ATTATTAATT ATGGTTGGTA TTATTGCTAC TCTACCACAA
GCATTTGCAC AAGAATGGGT GTCTAGAGTA AATCAATCTA ACGGTGGTCT AATAATGATC
CTTATAGAGC TAGTAATTTG GTTCTTTATC ATATTTGCTT CAGTAATGTT AGTAATGGCT
GTGCGACAAA TTCAAGTACA ATATGCTAGA AGAACACAAT CTGGAGGATA TGAAAAAGAT
GTTTTTGGTT CACGCCAATT TATACCACTA AAATTAAATG CATCTGGTGT AATGCCTATC
ATTTTTGCTC AAGCAATTAT GTTTATACCA GCAGCAGTAG CAGGATTATC AGAGTCTGAA
ACGTCTCAAG GTGTTGCAGC AGCATTTAGT GATATCTTCG GATTTTGGTA TAATTTAGTA
TTTGCGTTAT TAATCATTGT ATTTACGTAC TTTTACACCG CAATTACAGT ACCTACTAAT
AAGATTGCAG ATGATTTAAA GAGAAGTGGA GGTTTCATAC CAGGAATAAG ACCTGGAACA
GAAACTTCTG AATACTTAGA CAAGATTATG TCTCAAATTA CACTTCCAGG ATCTATTTTC
CTTGCACTAA TTGCTATTTT TCCAGCAATT GTAGGAGGAT TATTAGGTAT TCAACAAGGT
TGGGCATTGT TCTTTGGAGG AACATCACTA TTAATTATGG TTGGTGTTGC AATAGATACA
ATGCAGCAAA TAAACTCGTA CTTGTTGAAC AGGCATTATG ACGGGTTAAT GAAAACAGGT
AAGAATAGAA AAGCAGTAGC ATAA
|
|---|
| Protein sequence | MKFIQTLKNI WKIEELKNRI LVTLGLLLVY RFGAQVVLPG IDADQLGQFS GNFAGGGIGG
LLDAFTGGAF SNASIFALGI MPYISASIVV QLMGIAIPYL QKLQKDGESG RRKINQITRW
LTIAICLVQA PGYLASLPAL GVPTEAFVLG LTFQFYFTSV IILVTGTIFA MWLGEKITDK
GIGNGISLLI MVGIIATLPQ AFAQEWVSRV NQSNGGLIMI LIELVIWFFI IFASVMLVMA
VRQIQVQYAR RTQSGGYEKD VFGSRQFIPL KLNASGVMPI IFAQAIMFIP AAVAGLSESE
TSQGVAAAFS DIFGFWYNLV FALLIIVFTY FYTAITVPTN KIADDLKRSG GFIPGIRPGT
ETSEYLDKIM SQITLPGSIF LALIAIFPAI VGGLLGIQQG WALFFGGTSL LIMVGVAIDT
MQQINSYLLN RHYDGLMKTG KNRKAVA
|
|---|
| |