Gene CA2559_05580 details

Gene Information

• Locus tag: CA2559_05580
• ID: 9296613
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 1267266
• End bp: 1270622
• Gene Length: 3357 bp
• Protein Length: 1118 aa
• Translation table: 11
• GC content: 33%
• Product: putative membrane-anchored cell surface protein
• Protein accession: YP_003715879
• Protein GI: 298207700

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAA TACTACTTTT AATTAGTCTT CTTTTTACAT CAATATTTTA TGCACAATGT 
CCTACAGGAA ATTTTGCAGA TTTAAGAACA CAAGCCGATG TCGATGATTT TGGCGCCAAC 
TTTCCAAACT GTACCACACT TATTGATTTA AGAATAGGGA CAACTGCAGT ATCTACAGAT 
CAAATTACAG ACCTTTCGCC ACTTTCTTCA TTAACTACTG TTCAAGACTT ACTAGTTATA 
GAAAATGATG ATCTTTTAAA CTTAAACGGT TTAGGAAATA TAACTGTAGA GAATCTTACT 
ATTACTCAAA ATGAATCTTT ACAAAGCATT TCTACTAGTC AAATTGAAGT CACCTCTCAA 
CTAAGAATTC TTGATAATCC CTCATTAGTT AGTTTAGAAG GTTTTGAAGG AACAACAATG 
TTACAAGTTT TAGAGATTAG TAATAACCCT ATAACTTCTC TTTCAGGATT AGATAATCTC 
ACAACTGTAA CATTTTCTGC AGCAATTAAT GACAATGACG CTCTATTAAA CTTATCTGGT 
CTTGGAGGCT TAACCTTAGC TCGCGGATTA AGTGTAAACC AAAATAATAA TCTTCAAAAT 
TTAAATGGAG TTGGAATGCT TACTGTTGAT AATTTAGGTA TAAGCTCTAA TGTTGCTATG 
TCTGAAATTT CTACAACGAC GAGCATAAAT GTTACTGTAA ATTTAGAAGT GAATAATAAT 
ACTTCCTTGG ATAATTTTAC TGGCTTAGAA GAGACAACTC ACCTTCAAGA TCTTCGCCTT 
TCAAACAACG CCATAACATC ATTTACTGGA TTAAATAATC TTGTGGAGAT AAGTGATTTT 
TTCAGAATTA TACAATCTCC AAATATTACA AACTTTACAG GTTTAGATAA TTTAGGAATT 
ATAGAAAGTT TAGAAGTTAA TAATAATAGT AGCCTAACTA ACCTTAATGG ATTGCCTGAT 
GCTACCTTGT CTTTTGTCCT TATAAGCAAT AATCCTGTAC TACAGCAAAT TGCGACAACA 
AATACATTAC AGGTGACAGA AAGCTTGCAG GTTTTGTTAA ACGACGACCT AAATAACTTA 
CAAGGACTTG AAACAACAAC AAGCTTAAGT AATGTCTCAA TTAGTAGCAA TACTATTTCT 
TCTTTAGTGG GCTTAGAAAA TTTAACTGAG GTAACAGGGT TTTTAACTAT AGCTTCTAAT 
ATTATATTAC CTAACCTTAC AGGCCTTACC AATTTACAGA GTGTAATGAC ATTAGTTGTA 
GAGTTTAATG AGGATTTGAT TAACTTAGAT GGTTTGGGTA GCACTACTAT TCAAGAGTTA 
GCTGTTACAG ATAATCCATC AATGTCTTCA ATAGCATTAA CAAGTGAACT TGAAGGGATG 
CAAGAAATTG AAATAGTGGA CAATGCTCTG TTAACAGATC TAACTGGATT AGAGAATATT 
GTTTCAACCT CATTTATCGG TCTTAGCGGA AATGGTATAA CATCACTAAA TGGGTTGCAA 
AATTTAGAGA GCGTTCAAAA TTCCTTTATT ATAAATACTA ACGATATGTT ACCCAACTTG 
AATGGTTTAA CTAGCCTTCA ATATGTTGAG TCACTTACCG TAGGTCTTAA CGAGACAATG 
GTTAATTTAA ATGGTGTTGG TGATATACAG GTTGCAGCAT TAAGGCTTAC ACTTAGTCCT 
AATGTACAAC AACCATTAAC GCAAGGTTCA ATAGCTGTAA CATCTAGCAT AGCTATTGAA 
GATAATCCTA ATATCACAAA CTTAAATGGG TTAGAAACTA CAACTCAAGT TAGTTCTATT 
AGTATTGAAA GAAACCCTTT ATTATTTAAT ATTAATAGCT TGGAAAATGC AACTGTAGTA 
GGAAATGTGC AAATTATAGA TAATGCCGCG TTGTCTAATT GTAGTATAGA GAGCTTTTGT 
CTGGCCATTG CAGCAGGAAA TACAAATTTT AATATTGCCA ATAACGCAAC AGGTTGTAAT 
TCATTACAAG AAATTGAACA AGGCTGTATA GGTGTTGTTA ACTCTCTTAC AGGAACTATT 
TCTTTCGATA TAGATAACAA TGGCTGTAGT ACAGGAAACA CACCATCAGA AGGCATACTT 
GTTAGTGTAG AAAATTCAAA CGGAATACTA TCAACACTTA CAGATAGTAA TGGTAACTAT 
GTGTTATTAT TATCTGATAA TGAATATACG GTATATATAA ATGAACAATC TTTACCAAGT 
GATGTTTCGT TTTCTCCTGC AAGTCAAACT GTTTTATTCA CAGAATCTGA AACAGAGGTA 
ACTGCAGATT TCTGCCTAAC ATCTTCAAGT TCTTATGACG ACCTAGCAGT TTCAATTTTT 
CCATTAGAAG AAGCACGACC AGGTTTTGAA ACAGATTATT TAATCAATTT TGAGAATAAC 
GGAACTACAG TTTTAAATCC CACTATAACT TTAATGTTTG AAGATACTAA GATGAATTAC 
CTTAGTAGTA CACCTCAAGA GACTTCAGTA ACTAGTAATA TGGTAACTTG GAGTTTTAGC 
AACTTGCAGC CATTTCAAAG TGGCTCTATT GTGTTTACTA CAGACATTTT TCAGCCACCA 
ACAGTTAATG GAGACGATAT CCTAAGCTAT ACAGTAACAA TATCTCCAAA CTCAAATGAT 
GCTATTCCAG AAGATAATAG TCAGGTTTTC GAGCAAATAG TAGTAAATTC TTTTGATCCA 
AATGACAAGC AAGTAACACA AGGTGAAAGT ATTTTAGAAG CAGAAGTGCC TAATTATTTA 
GATTACCTGG TTCGTTTCCA AAATACAGGT ACAGCAAGTG CTGTAAATAT AACAGTAACA 
GATACATTAT CTAATAATTT ACAATGGGGA ACTTTAAAAG CAGTAGCTTC TAGTCATGAG 
TACAGATTAG AGGTAGAAGA TGGAAACATT GTAAAATTTA TTTTTGAAGA TATATTTCTT 
CCTGCAGAAC AAGATGACTC AGAAGGTAGT AACGGGTATG TTGCATTTAG AATAAAGCCA 
GTAGCAAGCC TTACAATTGG AGAGTCTGTA GAAAATACTG CAAATATCTT TTTCGATTTT 
AATGAGCCAA TCATCACCAA CACTGTAACT ACAGAGGTAG TGGCGCCACT TAGTGTCCCA 
GAAACTAGTA TGCCCGAAAA TATATTGATT TATCCTAATC CAGTAAATTC GTATTTAAAT 
GTAGAAACTG TTTCAGGTAA TACAGTCACA TCAATAGTAG TAACAACGTT AACGGGGCAA 
CGTTTATTAA CATCAAAGAA CACCTCTATT AATTTAACTT CTCTAACTAA AGGTATTTAC 
TTTGTGACAG TTACAACCCA GCAAGAAAAA TTTATAAAAC GAATAATAAA AGATTAA 

 

Protein sequence

MKQILLLISL LFTSIFYAQC PTGNFADLRT QADVDDFGAN FPNCTTLIDL RIGTTAVSTD 
QITDLSPLSS LTTVQDLLVI ENDDLLNLNG LGNITVENLT ITQNESLQSI STSQIEVTSQ 
LRILDNPSLV SLEGFEGTTM LQVLEISNNP ITSLSGLDNL TTVTFSAAIN DNDALLNLSG 
LGGLTLARGL SVNQNNNLQN LNGVGMLTVD NLGISSNVAM SEISTTTSIN VTVNLEVNNN 
TSLDNFTGLE ETTHLQDLRL SNNAITSFTG LNNLVEISDF FRIIQSPNIT NFTGLDNLGI 
IESLEVNNNS SLTNLNGLPD ATLSFVLISN NPVLQQIATT NTLQVTESLQ VLLNDDLNNL 
QGLETTTSLS NVSISSNTIS SLVGLENLTE VTGFLTIASN IILPNLTGLT NLQSVMTLVV 
EFNEDLINLD GLGSTTIQEL AVTDNPSMSS IALTSELEGM QEIEIVDNAL LTDLTGLENI 
VSTSFIGLSG NGITSLNGLQ NLESVQNSFI INTNDMLPNL NGLTSLQYVE SLTVGLNETM 
VNLNGVGDIQ VAALRLTLSP NVQQPLTQGS IAVTSSIAIE DNPNITNLNG LETTTQVSSI 
SIERNPLLFN INSLENATVV GNVQIIDNAA LSNCSIESFC LAIAAGNTNF NIANNATGCN 
SLQEIEQGCI GVVNSLTGTI SFDIDNNGCS TGNTPSEGIL VSVENSNGIL STLTDSNGNY 
VLLLSDNEYT VYINEQSLPS DVSFSPASQT VLFTESETEV TADFCLTSSS SYDDLAVSIF 
PLEEARPGFE TDYLINFENN GTTVLNPTIT LMFEDTKMNY LSSTPQETSV TSNMVTWSFS 
NLQPFQSGSI VFTTDIFQPP TVNGDDILSY TVTISPNSND AIPEDNSQVF EQIVVNSFDP 
NDKQVTQGES ILEAEVPNYL DYLVRFQNTG TASAVNITVT DTLSNNLQWG TLKAVASSHE 
YRLEVEDGNI VKFIFEDIFL PAEQDDSEGS NGYVAFRIKP VASLTIGESV ENTANIFFDF 
NEPIITNTVT TEVVAPLSVP ETSMPENILI YPNPVNSYLN VETVSGNTVT SIVVTTLTGQ 
RLLTSKNTSI NLTSLTKGIY FVTVTTQQEK FIKRIIKD