Gene CA2559_05540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_05540 
Symbol 
ID9296601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1253075 
End bp1253674 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content32% 
IMG OID 
Productputative ribonuclease HII 
Protein accessionYP_003715871 
Protein GI298207692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.734266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAC CGCAATACTT ATTAGATGTT ATAGAGTGTG GCACAGACGA AGCTGGAAGA 
GGTTGTCTTG CAGGTCCAGT TACAGCAGCA GCCGTTATTC TTCCACAAGA CTTCAATAAT
CCCGTTTTAA ATGACAGTAA AAAATTAACT CATAAACAAA GAGATTTACT AAGACCAATT
ATTGAAACAG AAGCTGTTTC ATTTTCTGTT ATACATATAG ATATAGATAC TATAGATAAG
ATAAATATTC TTAATGCATC TATTTTAGGG ATGCAGGAAT CTATAAGAAG TCTACAAACA
AAACCTGAAC ATATAGCTGT AGATGGTAAT AGGTTTAAAC CTTGTGATGA TATTCCTTAT
AAATGTATTA TTAAAGGTGA CGGCAAATAT TTAAATATTG CTAGCGCATC TATATTAGCA
AAAACATATA GGGATAACTA TATGGAGAAA ATACACGAAG AATTTCCGAT GTACAATTGG
AAACAGAATA AGGGGTACCC AACTAAAGAA CATAGAGAAG CTATAAGAAC TCACGGCCCT
TCAAAATATC ATAGAAAAAG CTTTAGGCTA TTACCAGAAC AATACCAATT TAACTTTTAA
 
Protein sequence
MLLPQYLLDV IECGTDEAGR GCLAGPVTAA AVILPQDFNN PVLNDSKKLT HKQRDLLRPI 
IETEAVSFSV IHIDIDTIDK INILNASILG MQESIRSLQT KPEHIAVDGN RFKPCDDIPY
KCIIKGDGKY LNIASASILA KTYRDNYMEK IHEEFPMYNW KQNKGYPTKE HREAIRTHGP
SKYHRKSFRL LPEQYQFNF