Gene CA2559_05070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_05070 
Symbol 
ID9296506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1148189 
End bp1149208 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content32% 
IMG OID 
Productputative LacI-family transcriptional regulator 
Protein accessionYP_003715778 
Protein GI298207599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.697537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAGTCACATT AAAGTCAATT GCCAAGGAGT TAGATGTATC AATTTCAACA 
GTTTCAAAAG CGTTAAAAGA CAGTCCAGAA ATTAGTAAGG ATACAAAGCA GAAAATTAAA
GCATTTGCAA AATTTTATAA TTACAAACCA AATAATATTG CTCTAAGTTT AAAGAACAGA
AAAACTAAAA CTTTGGGCAT TATCATTCCA GAAATAGTAC ACCATTTTTT TACTACCGTA
ATTAAAGGTA TAGAGCAAGT TGCTAATGAT GAAGGCTATA ATGTGATTGT ATGTCTTTCT
AATAACTCAT TTGATAAGGA AGTTATAAAC ATGGAGATAC TTGCTAATGG CAGTACAGAT
GGTTTTATAA TGTCTGTCGC TAAAGAAACA CAACAAAAGA AAGATTATCA TCATTTGGTT
GAAACCATAA ACCAAGGTAT GCCAGTTGTT ATGTTTGATA GGATGATTCC AGAAATTAAC
TGCGATAAAG TTATTATAGA TGATAAGAAA GGCGCACGGC AAGCGGTTCA GTTTCTAATT
GATAAAGGAG CAAAAAAGGT TGCGCTATTA ACTACAGTAG ATTATGTGAG CGTAGGAAAA
TTAAGAACTA CAGGATATTT AGAATGCTTA GAAAGTAATG ATTTACCTAT TGATGAATCC
TTAATTCTCA AAATAGAAGA TATGGACCAT TATGCTGAAA AAATCGAAGA ATTTTTGAAG
CAAACCTCTT GTGATAGCAT TTTTGCAGTT AATGAACATT TTGCTGTAGA GGCTATTAGA
GCCTTAAGGA CACAAGGAAA GTCTGTACCA GAAGATGTCT CTGTAATTGC ATTTACAGAT
GGCGAATTGT CTAAACATTT CATACCAAGT CTTACTACAA TTAATCAAAA AGGCTTAGAA
ATGGGTGCAA CTGCAGCAAA ACTACTTATT GATAAGCTTG AGCGTCCAGA AGATGAAAAA
GAGCTCTACC AAACCGTTAT ACTCGAAACA TCACTTATTG AAAGAGAATC TACAAAATAA
 
Protein sequence
MNKKVTLKSI AKELDVSIST VSKALKDSPE ISKDTKQKIK AFAKFYNYKP NNIALSLKNR 
KTKTLGIIIP EIVHHFFTTV IKGIEQVAND EGYNVIVCLS NNSFDKEVIN MEILANGSTD
GFIMSVAKET QQKKDYHHLV ETINQGMPVV MFDRMIPEIN CDKVIIDDKK GARQAVQFLI
DKGAKKVALL TTVDYVSVGK LRTTGYLECL ESNDLPIDES LILKIEDMDH YAEKIEEFLK
QTSCDSIFAV NEHFAVEAIR ALRTQGKSVP EDVSVIAFTD GELSKHFIPS LTTINQKGLE
MGATAAKLLI DKLERPEDEK ELYQTVILET SLIERESTK