Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_05045 |
Symbol | |
ID | 9296501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 1137936 |
End bp | 1140749 |
Gene Length | 2814 bp |
Protein Length | 937 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | putative alpha-amylase |
Protein accession | YP_003715773 |
Protein GI | 298207594 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.408257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAA TCTTTACATT TTTAGCAGTT TTAATGGTGA TGACGCTTTC AGCACAAAAC ATCACAATTA CACCTGCATC TTTTAACCAA ACAGATGAAA TTACAATCAC ATTATCAGGT ATAGATGTAC AACAACAATG GGGAACCTCA GATGTGTATT TATGGGCTTG GTTTTATGAG CCAAACAGTG ATGCTGCAAC CAACTCACCA GTAACTGGTA GTGGTGGTTT TGGTAATTCA CCAGCTGAAG CACAATTTAC AAACAATGGT GATGGTACAT ATTCTTATGT AATTTCAGAC CCTACGCAGT TTTATAATTC TACCAATATA GATCGAATCG GCGTGCTTGC TAAAAGCCAA AATGGAGCTA GCCAAACAGG AGATTTTATA TTTAATGTTG GTGTATTTGG ATTAAACCTT AACAATCCTA CAGAAGCAGT TTCATTTATA GATGCCGGAA ACACATTAAG TATTCAAGCT GAAACTGGTG TTACTGCAAA TTACGAGCTC TTTGTTAATG GTACTAGTAC AGATACTCAA AATGGACTAT CTACATATAC ATATGATGTA GTTATTTCAG AAGATTCAAA TTTTGAATTG GTTGCAACAA ATCCAGATAC TAATGAAACA CTTAGTGAAA CATTTCAAGT TTTATTAACA CCCAACCCTA CGTTAGCTGC CGTACCTGCA GGAATGAAAG ATGGTATAAA TATTTCAGAA GATAACACAT CAGTTACATT AGTACTTTAT GCACCTAACA AGGACTATGT TCATCTTATT GGTAATTTTA ATGGTACAGA TTGGGCACTA AGCAATGACT ATTTATTAAA TTTTGATGAA GCTCAAGACA AACATTGGAT TACATTAAAC AACCAAACGC CTGGAGAAAA TCTTTTGTTT CAATATCTAA TTGATACTGA AATTACGATA GCAGACCCTT ACTCTACCCT AGTACTTACA CCAAACAACG ATGTGTTTAT TCCAGAAAGC ACGTTTCCTA ACATTCCTGA TTATCCATCA GAAAAAACAC AAGATGCAAT TAGCTGGGTG ATTCCTGGAG CACCAGAATA CACGTGGCAA ATTGACAATT TCGAAAAGCC TGCAAAAGAA GATTTAGTAG TTTATGAGCT ACTTGTAAGA GATTTTGATG ACAATAAAAA CTTTCAGGAT GTTATAGATC GTCTAGATTA TCTAGAAACA TTAGGGATAA ACGCCATTGA ATTAATGCCA GTTTCTGAGT TTGATGGAAA CATAAGTTGG GGTTACAATC CACAATTTCA TATGGCACTA GACAAGGCGT ATGGAACACC AGATAAATTT AAAGAACTGG TAGATGAGGC ACACGCTAGA GGAATGGCAA TTATTCTTGA TGTAGTTTAC AACCAAGCAA CAGGGCAAAA CCCATTATAC AGAATGTATA ACAATTGCAA TGGTTGTTAT GGTGGTCAAG CAACTGCAGA AAGTCCATAT TTTAACCAAG TTGCACAGCA CTCTTACAAT GTATTTAATG ATTTTGACCA TAGCAGCAAT GCTACAAGAC AATATGTAAT GCAAACCGCT CAATATTGGA TAGAAGAATA CAAGATAGAT GGTATGCGTT GGGACTTAAC TAAAGGGTTT ACACAAAATT GCGAAGGTGA TGAAGGCTGT ACAAACAGCT ATAACCAAGA CCGCGTAGAT GTTTTAAAAC TATATGCAGA TGCACAATGG GATGTAGATG AAGATTTTCT TATCATTTTT GAACATTTAG GAAATGGAGG TTCAAGACAA GAAGAAATAG AATGGGGTAA CTATCGCTTA GATGAAGGAA AAGGTATTAT GACGTGGAAT AAATTGACAA ATCCTTATAA CCAAAGTACA ATGGGTTATA ATACAGAGAA TAATATTAGT GGTGTATCTT ATATAAATAA CAATTTTACC GCACCAACTC AAGTAAGTTA TATGGAAAGT CATGACGAAG AACGTCTTAA CTATAAAAAT TTAGCTTTCG GAAACTCTAA TGCGAGTTAT GATGCAACAG ACTTACCAAC GGCATTAGAC CGTTTAGAAG CTGCAGGAGC GTTCTTCTTT ACGGTTCCAG GTCCTAAGAT GATATGGCAA TTTGGAGAGC TTGGTTATGA AACAAGTATT TTTACGTGCT CTAACGGTAC GTTGCCTACA CCTTATGGTA ATGACCAATG TAAGCTAGAC GAAAAGCCAG ACGGTTGGGA CTTTCTAAAT GATCAAAATA GAGTAGATCT TTATAACACA TGGTCTCAAT TAATAGCGTT AAAATTAGCA GAGCCAATTT TTAAAACTAC AACCTTTACA TTAGATGTTG GTAACGCAAA TGGTTTAAAG AAAATACAGC TAGAAGATAC TAATGCTACA GGAAACTCTA TAAGGTATGT CACTGTTTTA GGAAACTTCG GTATTACCAC ACAAAGTATA AACCCAACAT TTCAAGAAAC AGGAACTTGG TATAATATGC TAACTAATGA AACTATAGAG GTAACAAACA CAGCTAATGA GATAAGTTTA GAACCAGGTC AATTTTACGT GTATGCTAAT GAAGCTAATA GCTTGAGTAC TCAAGACGTG TCACAACCTT CTTTACTTTC TGTTTACCCT AATCCTGCAA CACAAGGATT TAGCGTAACA CAGGCATTAG ATACTTTAGA GGTTTATGAC ATGAACGGAA GGTTAATTCT TAAGCAGTCA AACATTTCTA CTCAAGACAC TATCCAAACA GGTAATTTAT CTGAAGGGCT TTATATTGTT AAGGCAACTG CAAAAGGAAA TTCTTTTGTA ACTAAACTTC AGATTAAAAA ATAA
|
Protein sequence | MKSIFTFLAV LMVMTLSAQN ITITPASFNQ TDEITITLSG IDVQQQWGTS DVYLWAWFYE PNSDAATNSP VTGSGGFGNS PAEAQFTNNG DGTYSYVISD PTQFYNSTNI DRIGVLAKSQ NGASQTGDFI FNVGVFGLNL NNPTEAVSFI DAGNTLSIQA ETGVTANYEL FVNGTSTDTQ NGLSTYTYDV VISEDSNFEL VATNPDTNET LSETFQVLLT PNPTLAAVPA GMKDGINISE DNTSVTLVLY APNKDYVHLI GNFNGTDWAL SNDYLLNFDE AQDKHWITLN NQTPGENLLF QYLIDTEITI ADPYSTLVLT PNNDVFIPES TFPNIPDYPS EKTQDAISWV IPGAPEYTWQ IDNFEKPAKE DLVVYELLVR DFDDNKNFQD VIDRLDYLET LGINAIELMP VSEFDGNISW GYNPQFHMAL DKAYGTPDKF KELVDEAHAR GMAIILDVVY NQATGQNPLY RMYNNCNGCY GGQATAESPY FNQVAQHSYN VFNDFDHSSN ATRQYVMQTA QYWIEEYKID GMRWDLTKGF TQNCEGDEGC TNSYNQDRVD VLKLYADAQW DVDEDFLIIF EHLGNGGSRQ EEIEWGNYRL DEGKGIMTWN KLTNPYNQST MGYNTENNIS GVSYINNNFT APTQVSYMES HDEERLNYKN LAFGNSNASY DATDLPTALD RLEAAGAFFF TVPGPKMIWQ FGELGYETSI FTCSNGTLPT PYGNDQCKLD EKPDGWDFLN DQNRVDLYNT WSQLIALKLA EPIFKTTTFT LDVGNANGLK KIQLEDTNAT GNSIRYVTVL GNFGITTQSI NPTFQETGTW YNMLTNETIE VTNTANEISL EPGQFYVYAN EANSLSTQDV SQPSLLSVYP NPATQGFSVT QALDTLEVYD MNGRLILKQS NISTQDTIQT GNLSEGLYIV KATAKGNSFV TKLQIKK
|
| |