| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_04970 |
|---|
| Symbol | |
|---|
| ID | 9296485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1124028 |
|---|
| End bp | 1125467 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | decarboxylase, pyridoxal-dependent |
|---|
| Protein accession | YP_003715758 |
|---|
| Protein GI | 298207579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.421495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA ACGCCCATAA ATTAGAACTT ACCAAAGAAG AAATGAGAAC ACTTGGCTAT
AAAGCTATAG ATGAACTCGT GGAACATTTT GATACTCAAA ACTCTAAATT ACCAGTAGCC
GAAGGCTCAA GAGAAGATAT GGACAAGTTG TTTCTTGAAG ATGCTCCAGA AGAACCAACA
GATGCTATGA GCGTCCTTAA TTTTGTGGTA GACAAGGTGA TGTCTAACAG TAATATTGTT
TCGCATCCAA AATCATACTC TTTTGTTCCA GGACCAAGTA ACTATGTAAG CACAATAGCA
GATACTTTAG CAACAGGATT TAATGTGTTT TCTGGTGGTT GGGTAGCTTC TCCTGCCGCA
GCAGAGTTAG AGATTGTAAC AATTAACTGG CTCTTAAAAC TGTTTGGTTT TCCCTCTAAA
CGTGGTGGCG GTATCTTTAC TAGTGGCGGC TCTATGGCAA ACCTAACAGC AATTGTTACA
GCAAGACGTA TTAAATGTGG TGAAGACTTT AGTAAAGCTG TTCTTTACCT TAGCGATCAA
GCACACTCCT CAAACATTAA AGCTATTACC ATTTTAGGGT TTAGAAGAGA TCAAATTAGG
ATCATCCCAA CAGATTTAGA GTTTAAAATG TCTCTTAACA AGTTACAGAA TGCTATAGCA
AAAGATCGTT TACAAGGCTT ACAGCCGTTT TGTATTGTAG CGTCTTCTGG AACAACCAAT
ACAGGAACTG TAGATCCATT ATTAGAACTT TCTAAAATCT GCAAGAAAGA AAAACTCTGG
TTTCATATTG ATGGTGCCTA TGGCGGTGCA GCAATTTTAG CTAAAAATGG AAAGCAATTG
TTAAAAGGAA TTGATAAAGC CGATTCCCTA ACTGTTGATC CTCACAAATG GTTTTACCAA
CCTTATGAAA TGGGCTGCCT ATTAGTAAGA AACAGCAAGT GGTTAAAACA TACATTTACA
GAAAAACCTG AATATTTAAA AGATGTTGAA GGCAATGATA GTGAGATAAA TTTTTACGAT
CATGGCGTAC AACTTACAAG AAGGTTTAGA GCATTAAAAT TATATATGTC TGTTAAGACA
TTTGGGCTAA AAGCTTTTAG AAAAGCAATA GATTATAACT TAAAACTTGC AGAGCAAACA
GAGGCTATTT TACGCAAGAG TTCTAAATGG GAAGTAGTAT CACCCGCTAC ACTAGCTGTA
ATTAATTTTA GATACAACTC AATTAAACTA AACCTTAATG AGGAAGAATT AGATGAGTTG
AACCAAAAAA TTAGTGAAAA GATAATGGCT TCAAGAGAGG CGCTTCTTGT AACGACAATT
CTTCAAAATC AAATTGTGTT GCGCATGTGC TTAATAAACC CGAGAACAAC TCTAGAAGAT
GTAAAAGGGA CAATAAATCT GTGTGAGAAA TTTGCAGAAG ATATACTCAA AAATGCATAA
|
|---|
| Protein sequence | MTTNAHKLEL TKEEMRTLGY KAIDELVEHF DTQNSKLPVA EGSREDMDKL FLEDAPEEPT
DAMSVLNFVV DKVMSNSNIV SHPKSYSFVP GPSNYVSTIA DTLATGFNVF SGGWVASPAA
AELEIVTINW LLKLFGFPSK RGGGIFTSGG SMANLTAIVT ARRIKCGEDF SKAVLYLSDQ
AHSSNIKAIT ILGFRRDQIR IIPTDLEFKM SLNKLQNAIA KDRLQGLQPF CIVASSGTTN
TGTVDPLLEL SKICKKEKLW FHIDGAYGGA AILAKNGKQL LKGIDKADSL TVDPHKWFYQ
PYEMGCLLVR NSKWLKHTFT EKPEYLKDVE GNDSEINFYD HGVQLTRRFR ALKLYMSVKT
FGLKAFRKAI DYNLKLAEQT EAILRKSSKW EVVSPATLAV INFRYNSIKL NLNEEELDEL
NQKISEKIMA SREALLVTTI LQNQIVLRMC LINPRTTLED VKGTINLCEK FAEDILKNA
|
|---|
| |