| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_04905 |
|---|
| Symbol | |
|---|
| ID | 9296471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1112803 |
|---|
| End bp | 1113918 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | putative two-component system sensor but no kinase domain |
|---|
| Protein accession | YP_003715745 |
|---|
| Protein GI | 298207566 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.339726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAACC AGTCATTCGT CTCAAAAGTT ATAAGTATTG CTCAATTTTT AGCATCTTGC
AGTGTGGATA TATTAAAATT CAATCAAACT AAATTTTTAG CATCTCATAT TCTTTTATGG
GTAGGTGTTT GGTTCTTTTT TGTGTATTTC TTTAGTTACA ACTCTTCAAA CTCACTTTAC
GTTACTTGGT TTTCTAGTAT TTTGTTACCC TTAACAATGG CAACAACCTA TACTACTGTT
TACTACCTTA TTCCTAAATA TCTATTAACT AGAAATTATG GGTTATTTGT ACTATACTCT
ACCTACACAT TAATCTTTAC ATCTTATATA GTTATCCTTA CAATGTTTGG CAGCTTTATG
CTTTTGTCTA ATTTTAATGT AGTGGATATG CCGCCTATGA GTAGAAACTT TGTGTTTATA
CTTATTTTAG TATACCTCAT AGTAGGTCTT GTAAGCTTTG TAAGCATACT TAATTATAAT
TTTAAGACGC TATCAAAAAA TAAAGCCTTA GAGAATAAGA TATTAGATGC ACAGCTAAAA
ATTAAAGACC AAGAATTACA TTATTTAAAG AAGCAAATTC ATCCTCACTT TCTGTTTAAT
TCTTTAAATA CCATTTATGG ATTTTCACTG AAGAAATCTG AACAAACTCC AGATGTTATA
CTGAAGCTAT CTAATTTGCT AGATTATATT TTATACCAAG TACAACAACC TAAGGTAGCT
TTAAAACAAG AGATTATACA TATTGAAGAT TATATTAGTC TTGAGCAAAT TCGTTTTCAG
GATACCTTAA AAACTAAGGT AAACTACAAC ACCTTTAATC CTAATCTTGA AATACCACCT
ATGCTGTTTT TACCATTTGT TGAAAATGCA TTTAAGCATG GCGCAATCCT CAATGGTTTC
TTACAGATAG AGATGACAGT AAATGTGCAG ACAGCTAGCA TTGAGTTTGA GATAAAAAAT
ACAGTAAAAT CTAAAACACC AGCTAACGGT AATGGCTTAG GATTACCAAC CATTAGAAAG
CGATTAGACT TGTTATACCA AGATAATTAT GAGTTAAACT CTAGCTTAGT GAATAACTGG
TATACTGTTA ACTTAAAATT AAACACCAAT GTCTAA
|
|---|
| Protein sequence | MLNQSFVSKV ISIAQFLASC SVDILKFNQT KFLASHILLW VGVWFFFVYF FSYNSSNSLY
VTWFSSILLP LTMATTYTTV YYLIPKYLLT RNYGLFVLYS TYTLIFTSYI VILTMFGSFM
LLSNFNVVDM PPMSRNFVFI LILVYLIVGL VSFVSILNYN FKTLSKNKAL ENKILDAQLK
IKDQELHYLK KQIHPHFLFN SLNTIYGFSL KKSEQTPDVI LKLSNLLDYI LYQVQQPKVA
LKQEIIHIED YISLEQIRFQ DTLKTKVNYN TFNPNLEIPP MLFLPFVENA FKHGAILNGF
LQIEMTVNVQ TASIEFEIKN TVKSKTPANG NGLGLPTIRK RLDLLYQDNY ELNSSLVNNW
YTVNLKLNTN V
|
|---|
| |