Gene CA2559_04685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_04685 
Symbol 
ID9296427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1062445 
End bp1063581 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content31% 
IMG OID 
Productsuccinate dehydrogenase 
Protein accessionYP_003715701 
Protein GI298207522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAATA AACGTCTTCT TATAAAGCAC CTACTTGCTC ACAATGATGA GAACAGCTTT 
TATGACAAAA AGCGTAAGAT TAGCTTAGGT AGCAAAGAAG GAAAAGCCAA ATTTCTTAAA
CATATTTGTG CACTTTCAAA TAGCAACCCA GAAAACAACA GCTATATAGT TATTGGCGTA
GAAGATGAAG ATAACAGTAT TTCAGGTGTC GATTTCTATG ACGATGCAAA AATTCAAAAT
TTAGTAAACG CGTATTTAAG TAATGCTCCA ATTGTAGCAT ATGAAAACAT ACCTTTTCCA
CATTTGCCAG ATGACAAGGT TGTAGGATTA GTAACAATTA GACCCAATAA AGGAAAAATT
TGTTCGCTTA GAAAGAACAT ATGGAAATAC TATGGAGGCT CTGTATTTTT TAGAGACGGT
AGCATATCTA TGCCAAAGGT TTATGATTTA AAGATTGAAG ACAAAAATTC AGAAATAGTA
AAAGCAATTG AGGATCACGC TCAAAACAAT GTAGAACTAA CCTTAGATGG TGTTTTTGAT
TTTTTGAATA AGCGTAAAGA TTTTAATCCC AAATACAAAG TATTTAAGGA GTACTTTGTA
GTATGTTGGG CTGGAAAGAA AAAAACAGTG AAAGAAAATG TTTACTATTC CAGAGTAGAT
ATTGCTTTGA TTAATGAACA AGTAAAGCTT TTTTATTCTG AATTAGATGA AGTAAGTTTT
AGCATTACAG AAGATGAATT TCAAATTATT GAATATGTAT ATTTAGGACT GCAACATCAA
AAAAAATATT ACCCACTTGA AGAGGTTTCT ATAAAGTTTA AAGATAATGT GAGTTATGAC
ATAGAAACCA AATTGCTATT TAAGCCGCCA CAATATGATA AGAAAACCTT GTATCATATT
TATAATTCTG CCAATACATT GTTGGAGAAG TTAAAAAACA AAGCACCACT TACTACAGCA
GAAAAATTAG ATGTTTTTCA ACTACCGCAA ACCTATCTCA TTTGTTATTT TAATGAATTT
GAAGATGCCT TGATAAAACT AGAGTCTGCT AAGTATCATT TAAAATCCTA TGATACAGAT
GCATATTCTA ACTTTAAAGA CAGCGTTAGG ATTTTAAGAA AGGTAAAATA CAATTAG
 
Protein sequence
MINKRLLIKH LLAHNDENSF YDKKRKISLG SKEGKAKFLK HICALSNSNP ENNSYIVIGV 
EDEDNSISGV DFYDDAKIQN LVNAYLSNAP IVAYENIPFP HLPDDKVVGL VTIRPNKGKI
CSLRKNIWKY YGGSVFFRDG SISMPKVYDL KIEDKNSEIV KAIEDHAQNN VELTLDGVFD
FLNKRKDFNP KYKVFKEYFV VCWAGKKKTV KENVYYSRVD IALINEQVKL FYSELDEVSF
SITEDEFQII EYVYLGLQHQ KKYYPLEEVS IKFKDNVSYD IETKLLFKPP QYDKKTLYHI
YNSANTLLEK LKNKAPLTTA EKLDVFQLPQ TYLICYFNEF EDALIKLESA KYHLKSYDTD
AYSNFKDSVR ILRKVKYN