| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_04300 |
|---|
| Symbol | |
|---|
| ID | 9296350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 979024 |
|---|
| End bp | 980205 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | integrase |
|---|
| Protein accession | YP_003715624 |
|---|
| Protein GI | 298207445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.662362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC TAGAAGATGC GATTGATGAG GTTTATAAAG AGTATGATAG GAAAGGTGAA
ATACCTAATC CAAAAGAGTT TAAAGAGCAA GTAGAAATAT ATTTAGGAAG GAAGGCAAAT
ATAATTCAAG AGCAACCCAC CATTTTAGAG TATTTGAATT CTAGAATTGC TAAGGATAAA
GATAACCTTC GCAGAGGTGT TCAAAAGGGA AGAAAAAACA GCACCATCAA AACATACAAT
ACACTAGCTC GTGATTTAGA GAACTATAAT TTAGCAACTG GAAATTCTTT AAGATTTGAA
ACCTTTACAG ATGATAATTA CTGGAATTTC TTCGACACAC TTGATGCCAT TCTAAAAGGC
AAATACTCAA TTGACAATCC AAATCAGCCG AAAAAACAAA TAATAAAGGA GTACGGCTTT
TTAAAAAACT CTTTACGTAA AAAGCAAACG TCCTTCCTTA GTTTGTTTAA AGAAGCCTTA
GAAAAAGGCT TCACATCAGA CTTCAATCCT AGTCAAAAAA ATTTATTGGT TGAACGTTCT
GAAAGCTCTA AAGACCTTTA TATTAGAGAA GATGAGCTTC AATCTATCAT AGACGCTAAC
GTTTCTCATG ATACAGCATT GCAAAATGCA AAGGAGTATA TTTTGATTGC TTCACTTACT
GCATCCAGAA ATGAAACGAT GAATGTATTG TATAAAGAGC CAATACAAAC CTATAATTCT
GAGGGAATTA CATTTGATTA TTTTCATAGC AAACATAACA AAACTGGCAC TGAATGTTTT
ATCCCAATTC TAAAGCCAGT TTCAGAGATT ATAAAAAATT ACAATGGCAC TTTTCCCAAA
TTTTATGCAA ACTCAAAAAC CAATTCTAAT CTTAAAGACT TATTTGAAGT TATAGGCTTG
GAACGTGAAG TAAATGTAAA GCTAGATACA TATAAAAGTG GTTTATTCGA GTTTAAAAAG
CCACTTTTTG AAGCAATCTC AACCCACGAT GCAAAAAAGA CGTTTACATC AATACTAGCG
AATTATCAAA TTCCAGAAAA TATTGTCTCA AACGTTACCC ATCCAGACAA ACCATCTAAA
AACAGAATGT TTGACACTTA TAACAAACAG TCTATGCTTG ATAAGGCGAA ACAATTTGCA
ATGGAGATAA ACAAAATAAA TTCTAATATC TTTAAACTTT AA
|
|---|
| Protein sequence | MNKLEDAIDE VYKEYDRKGE IPNPKEFKEQ VEIYLGRKAN IIQEQPTILE YLNSRIAKDK
DNLRRGVQKG RKNSTIKTYN TLARDLENYN LATGNSLRFE TFTDDNYWNF FDTLDAILKG
KYSIDNPNQP KKQIIKEYGF LKNSLRKKQT SFLSLFKEAL EKGFTSDFNP SQKNLLVERS
ESSKDLYIRE DELQSIIDAN VSHDTALQNA KEYILIASLT ASRNETMNVL YKEPIQTYNS
EGITFDYFHS KHNKTGTECF IPILKPVSEI IKNYNGTFPK FYANSKTNSN LKDLFEVIGL
EREVNVKLDT YKSGLFEFKK PLFEAISTHD AKKTFTSILA NYQIPENIVS NVTHPDKPSK
NRMFDTYNKQ SMLDKAKQFA MEINKINSNI FKL
|
|---|
| |