Gene CA2559_03490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_03490 
Symbol 
ID9296185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp798361 
End bp798900 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content32% 
IMG OID 
Productputative RNA polymerase ECF-type sigma factor 
Protein accessionYP_003715462 
Protein GI298207283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTTAG ATCAACTCAT TCTTAAATGC AAAAAGCAAG ACATAAAGGC ACAAGGACAG 
CTGTATCAAT TATTTGCAGA TAAGCTGTTT AGTGTAAGCC TAAAGTATTC TCGTAATTAT
AGCGAAGCAG AAGACAATTT GCAAGATGCT TTTTTACAGA TATTTAAGAA AATAGATCAA
TATAAAAATA AAGGTTCTTT TGAAGGTTGG TTAAAACGTA TTGTAATAAA CATAGCACTT
CAAAAATATA GGAAGCAAAC CTATTTTGAA ATTGTAGACG AACAACAACT AGAAGAACCT
AGTGTAGAAG TAGAAGAAAA TGATATTAAG TTAGACTTTC TTTTAAAGTG CATACAACAA
TTACCAGACA GGTACAGGTT AGTATTTAAC CTATATGTTT TAGATGGTTA CGCACATAAA
GATATTGCGG ATTTGTTAAG CATCTCTGTA GGAACATCTA AATCTAACCT TGCAAGAGCA
AGACATATAT TAAAGGCAAC TATAGAAGAC GCCCAACCAA AAGGACAACA GTCTCTTTAA
 
Protein sequence
MSLDQLILKC KKQDIKAQGQ LYQLFADKLF SVSLKYSRNY SEAEDNLQDA FLQIFKKIDQ 
YKNKGSFEGW LKRIVINIAL QKYRKQTYFE IVDEQQLEEP SVEVEENDIK LDFLLKCIQQ
LPDRYRLVFN LYVLDGYAHK DIADLLSISV GTSKSNLARA RHILKATIED AQPKGQQSL