Gene CA2559_03490 details

Gene Information

• Locus tag: CA2559_03490
• ID: 9296185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 798361
• End bp: 798900
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 32%
• Product: putative RNA polymerase ECF-type sigma factor
• Protein accession: YP_003715462
• Protein GI: 298207283

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTTTAG ATCAACTCAT TCTTAAATGC AAAAAGCAAG ACATAAAGGC ACAAGGACAG 
CTGTATCAAT TATTTGCAGA TAAGCTGTTT AGTGTAAGCC TAAAGTATTC TCGTAATTAT 
AGCGAAGCAG AAGACAATTT GCAAGATGCT TTTTTACAGA TATTTAAGAA AATAGATCAA 
TATAAAAATA AAGGTTCTTT TGAAGGTTGG TTAAAACGTA TTGTAATAAA CATAGCACTT 
CAAAAATATA GGAAGCAAAC CTATTTTGAA ATTGTAGACG AACAACAACT AGAAGAACCT 
AGTGTAGAAG TAGAAGAAAA TGATATTAAG TTAGACTTTC TTTTAAAGTG CATACAACAA 
TTACCAGACA GGTACAGGTT AGTATTTAAC CTATATGTTT TAGATGGTTA CGCACATAAA 
GATATTGCGG ATTTGTTAAG CATCTCTGTA GGAACATCTA AATCTAACCT TGCAAGAGCA 
AGACATATAT TAAAGGCAAC TATAGAAGAC GCCCAACCAA AAGGACAACA GTCTCTTTAA 

 

Protein sequence

MSLDQLILKC KKQDIKAQGQ LYQLFADKLF SVSLKYSRNY SEAEDNLQDA FLQIFKKIDQ 
YKNKGSFEGW LKRIVINIAL QKYRKQTYFE IVDEQQLEEP SVEVEENDIK LDFLLKCIQQ 
LPDRYRLVFN LYVLDGYAHK DIADLLSISV GTSKSNLARA RHILKATIED AQPKGQQSL