Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_03225 |
Symbol | |
ID | 9296130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 739271 |
End bp | 741148 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | Na(+):H(+) antiporter, CPA1 family protein |
Protein accession | YP_003715409 |
Protein GI | 298207230 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGAAT TAGCAGGTAT CATCATTTTA GGAATATTGG CACAATGGGT TGCTTGGAAG TTTAAAATCC CAGCAATTTT GCCGCTTATT TTAATTGGGC TTTTAGTTGG TCCTTTAGCA ACGTTATACA CAGATGGCGG TGTTAAATTA ATACAACCTA TATGGAATGG TGAAAAAGGC TTATTTCCAG GAAAGAGCTT ATTTTACTTT GTAAGTCTTG CCATTGGAAT TATTTTATTT GAAGGTGGTC TTACTTTAAA GTTAAGTGAG ATAAAAACTA CGGGTTCTGT AATTACTAAG TTAATTTCAA TTGGGGTTAT TGTCACATTT TTTGGAGCAG CGTTAGCCGC ACATTTTATC TTCTTTTTAA GCTGGCCAAT ATCATTCTTG TTTTCAGCTT TAATAATAGT AACTGGACCT ACAGTAATTT CACCTATACT TAGAAACGTG CCACTAAAAA AAGATGTTTC TGCTATTTTA AAATGGGAAG GTATTTTAAT AGATCCAATA GGTGCTTTAT TTGCCGTTTT GGTATTTGAA TTTATAAGCG TTGGAGCAGG TAGCGAGTTT ACTATTACCG CTTTAGAAGA GTTTGGTAAA ATTGTACTTT TTGGCTTTAC GTTTGGTTTT ACATTTGCTC ATGCTTTAGC ATTTGCAATA AAGAAAAATG TGATTCCTCA TTACCTACTA AACGTATTTA CACTTGCTAT GGTATTAGCA GTGTTTGTAC TTTCAGATTT GTTTGCACAC GAAAGCGGAT TACTTTCTGT AGTTGTTATG GGTATGGTTA TGGGTAATAT TAACCTTCCT AACATAAAGG AACTTTTATA CTTTAAAGAA TCTCTTTCTG TATTATTAAT TTCAATACTA TTTATTCTGC TTGCAGCTAA TATTAATATA GATGATTTAC TATTAGTCTT TAATTGGAAT GCAGTAGTAC TATTTGCAAT TGTAGTATTA CTAATTAGGC CTCTTGGCGT CTTTTTAAGC AGTATAAACT CAGGATTACA GCTTAATGAA AAACTATTTA TAAGTTGGGT AGGACCACGT GGTATTGTTG CTGCAGGTAT TGCTTCCTTA TTTGGTTTAC AACTAACACA AGAAGGAATT GAAGGCGCAG AGTACATTAC GCCATTGGTA TTTATGATAG TGTTAGGAAC GGTATTATTA AATGCAACAA CTGCAAGGAT GTTTGCCAAA CTAGTGGGTG TATTTTTGAA AAACTCAGAA GGCATTTTAA TCATTGGCGC TTCAAAGGTT AGCCGCTTAA TAGCTAGCTA CCTTCATAAA AATGGGCGTC ACGTTGTTTT GGTAGATAGT AACAACTTAA ATATCAAAAA AGCAAAAGAA TTAGGCTTAG AGGCAATGGA AGCTAGTGTT TATGCAGATG ATTTAATAAG TAATATTGAG TTGAATGATG TAGGGTACTT AATGGCTCTA ACAGGAAATG CAGAAATTAA TAACTATGCG TTAGATAAAT TTGAAGCTCA ATTTGGTGAA AATGGATCAT TTAGACTCAT TAGCCCAGAA GAAATGAATA ACCCTCAAAA AAACCCAAGA CAAGGTTTAT TCTCACATAC AGATGATTAT ATAAAACTTA CAGATGTTGC TAGAAAATAT CCAGCAATAC AAGAAATAGA TATAGATACT AAAGAACAAT TTGAAGGCCT TATAGAAATG ACTAAATCTG AAAAAGATAT GGTACCTCTA TTTATAAAAA AGGCAGATGG ACAAATAGAT ATACTAAGCT CATTTAGTAA AGATGTAAAC GTTGAAAATT TTGAAGGACA TAAATTAGTT TACCTAGGAA AACCAATAGA TGTTGAGCAA TTAGCAGACT CTACAACTGC TATGGAAGAT GAAGATAACT CTATGTAA
|
Protein sequence | MLELAGIIIL GILAQWVAWK FKIPAILPLI LIGLLVGPLA TLYTDGGVKL IQPIWNGEKG LFPGKSLFYF VSLAIGIILF EGGLTLKLSE IKTTGSVITK LISIGVIVTF FGAALAAHFI FFLSWPISFL FSALIIVTGP TVISPILRNV PLKKDVSAIL KWEGILIDPI GALFAVLVFE FISVGAGSEF TITALEEFGK IVLFGFTFGF TFAHALAFAI KKNVIPHYLL NVFTLAMVLA VFVLSDLFAH ESGLLSVVVM GMVMGNINLP NIKELLYFKE SLSVLLISIL FILLAANINI DDLLLVFNWN AVVLFAIVVL LIRPLGVFLS SINSGLQLNE KLFISWVGPR GIVAAGIASL FGLQLTQEGI EGAEYITPLV FMIVLGTVLL NATTARMFAK LVGVFLKNSE GILIIGASKV SRLIASYLHK NGRHVVLVDS NNLNIKKAKE LGLEAMEASV YADDLISNIE LNDVGYLMAL TGNAEINNYA LDKFEAQFGE NGSFRLISPE EMNNPQKNPR QGLFSHTDDY IKLTDVARKY PAIQEIDIDT KEQFEGLIEM TKSEKDMVPL FIKKADGQID ILSSFSKDVN VENFEGHKLV YLGKPIDVEQ LADSTTAMED EDNSM
|
| |