Gene CA2559_03160 details

Gene Information

• Locus tag: CA2559_03160
• ID: 9296117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 721645
• End bp: 722283
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 36%
• Product: ribonuclease H-related protein
• Protein accession: YP_003715396
• Protein GI: 298207217

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACTA AGTCTCCCAA ATTTTATGTT GTATGGAAAG GAAAAAAACC AGGTATTTAT 
AAAACTTGGG CATCTTGCAA AGCTAGCATA GATGGCTATA AAGGTGCATT GTATAAATCT 
TTTCCAACCT TTGCAGCAGC ACAAAAAGCC TATAATGGTA ATTACGAAGA TTTTAAAGGC 
AAAAGTGCAA AGCTTAGAGT CCTTTCTGAA GCAGACAAAT TAAAATATGG AACTCCTAAC 
TTTAACTCAA TTGCTGTAGA TGCTGCATCT AGTGGAAATC CTGGGAAAAT GGAATATCGC 
GGCGTAGACA CTAAAACTAA AAAACAACTT TTTCATCAAG GGCCGTTTTT ACAAGGCACA 
AATAATATAG GAGAGTTCTT AGCGTTGGTT CATGGCTTGG CCTTTTTAAA AAAACACAAC 
AGTGATAGGA TAATATATAC AGACTCCAGA ATAGCTATGG GTTGGGTTCG TAAGAAGAAA 
TGCAACACCA AACTATCATT AAATGCCAAA AATAAAAATG TGTTTGAGTT GGTAAAGCGT 
GCTGAGCATT GGTTAAAAAC CAATTCTTAT AATACACCTG TTGTAAAATG GGAAACAAAA 
GCTTGGGGAG AAATTCCCGC AGATTTTGGG AGAAAGTAA 

 

Protein sequence

MATKSPKFYV VWKGKKPGIY KTWASCKASI DGYKGALYKS FPTFAAAQKA YNGNYEDFKG 
KSAKLRVLSE ADKLKYGTPN FNSIAVDAAS SGNPGKMEYR GVDTKTKKQL FHQGPFLQGT 
NNIGEFLALV HGLAFLKKHN SDRIIYTDSR IAMGWVRKKK CNTKLSLNAK NKNVFELVKR 
AEHWLKTNSY NTPVVKWETK AWGEIPADFG RK