| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_02005 |
|---|
| Symbol | |
|---|
| ID | 9295886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 494707 |
|---|
| End bp | 495999 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_003715167 |
|---|
| Protein GI | 298206988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAG AAATGAAAGT GCCTTCACCA GGCGAATCCA TAACCGAAGT TGAAATCGCA
CAGTGGCTTG TTGAAGATGG CGACTATGTT GAGAAAGACC AAGCAATTGC AGAAGTAGAT
AGTGACAAAG CAACACTAGA ACTTCCTGCT GAAGCAAGCG GTATTATTAC ACTTAAAGCA
GAAGAAGGTG ATGCTGTCGA GGTTGGTGCA GTTGTATGCT TGATAGATAC AGATGCAAAA
AAACCTGGTG GTGATGACAA GGCTGCTAGT GGTGATGAAG GTAGCGGAGA CGATGCCGAA
AAAGACCTTA AAGAACAAAA TAAAAAAACT GAGGATACTA ATGAAAAAGG TGATGCTCTT
AAGCAAACAC CTTCTAAACC TAGTACTCAA GACCAGAAAC AAGATAATAA GAACTACGCA
ACTGGATCTC CTAGTCCTGC CGCTAAGAAA ATCTTAGATG AAAAAGGAAT GGACTCTAAA
GATGTTAGTG GCTCTGGAAG AGACGGCCGC ATAACTAAAG ATGATGCTGT AAAGGCAAAA
CCGTCTATGG GTTCTCCTGG AAATGGAAAA AGAGGTGAAA GCCGCACTAA ATTATCTATG
CTTCGTCGTA AAGTAGCAGA GCGTTTAGTT TCTGCTAAAA ATGAGACAGC AATGCTTACT
ACTTTTAATG AAGTAGATAT GTCTCCAATC TTTAGCTTGA GAAAACAATA TAAAGAAGAG
TTTAAAGCAA AACACGGCGT AAGTCTTGGC TTTATGTCAT TCTTTACACT TGCTTGTGTT
CGTGCATTAG AAATGTATCC TGCTGTAAAT TCTATGATTG AAGGTAAGGA AATGATTACC
TATGATTATA AGGATATATC TATTGCAGTA TCTGGACCAA AAGGCTTAAT GGTACCTGTA
ATGAGAAACA CAGAAAATTT AAGCTTTAGA GGCGTAGAAG ATGAAGTAAA GCGTCTGGCT
TTAAAAGCAA GAGATGGTAA AATTACTGTA GATGAAATGA CAGGTGGTAC TTTTACAATC
TCAAACGGAG GCGTATTTGG AAGTATGTTA AGTACTCCTA TAATTAATCC TCCACAATCT
GCAATTTTAG GAATGCACAA CATTGTTGAG CGTCCAGTTG CTATTGATGG GCACGTTGAA
ATTAGACCTA TAATGTATGT GGCATTATCT TATGACCACA GAATTATTGA TGGAAAAGAA
TCTGTAGGTT TCCTTGTTGC TGTTAAAGAG GCATTAGAAA ATCCAGAAGA ATTATTAATG
GATAATGACG TTAAACGCGC TTTAGAATTA TAA
|
|---|
| Protein sequence | MALEMKVPSP GESITEVEIA QWLVEDGDYV EKDQAIAEVD SDKATLELPA EASGIITLKA
EEGDAVEVGA VVCLIDTDAK KPGGDDKAAS GDEGSGDDAE KDLKEQNKKT EDTNEKGDAL
KQTPSKPSTQ DQKQDNKNYA TGSPSPAAKK ILDEKGMDSK DVSGSGRDGR ITKDDAVKAK
PSMGSPGNGK RGESRTKLSM LRRKVAERLV SAKNETAMLT TFNEVDMSPI FSLRKQYKEE
FKAKHGVSLG FMSFFTLACV RALEMYPAVN SMIEGKEMIT YDYKDISIAV SGPKGLMVPV
MRNTENLSFR GVEDEVKRLA LKARDGKITV DEMTGGTFTI SNGGVFGSML STPIINPPQS
AILGMHNIVE RPVAIDGHVE IRPIMYVALS YDHRIIDGKE SVGFLVAVKE ALENPEELLM
DNDVKRALEL
|
|---|
| |