| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_01970 |
|---|
| Symbol | |
|---|
| ID | 9295879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 487332 |
|---|
| End bp | 488702 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | outer membrane efflux protein, putative |
|---|
| Protein accession | YP_003715160 |
|---|
| Protein GI | 298206981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.154405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATA GAATAGTAAT GCTCCTGCTC TTTGTGAGTA GTGTGGCATT TTCACAAGAA
GCCCCTAAAT CCTACAGTTT TTCTTTAGAG GAAGCTGTAA ATTATGCATT GGATAGCAGC
TATACTGCAA TTAATGCAAG ACGAGATGTC GCCAAAGCTT TAAAGCAAAA ATGGGAAACT
ACAGCAGACG GTTTGCCACA AATTAATGGC TCGGTAGATT ATCAAAATCA ATTAAAGCAA
CCTGTAACAT TTATTCCTGC AGAGTTTTCT GGAGGAGAAC CAGGAACCTT TACACCGGTA
ACCTTTGGTG CCAAACAATC TGCAAACTTA ACAGCGACGT TAAGCCAAGT AATTTTTGAT
GGTTCTTATT TGGTAGCCCT TAAAGCCTCA ACTGCATTTC TTGAATTTTC TGAAAATGCA
AATGAGAAAA CACGGTTAGA AGTAAGAAAA GGTGTAATTA ACGCTTATGG TGGTGTGTTG
CTAACAGAAG AAAGTGTAAG CATAGTAGAA AAAAACATAG ATGCTATTAC AGACAATCTC
TCTGAAACAC AAGCATTGTA TGAAGAAGGC TTTGCAGAAG AGGAAGATGC AGAGCAATTA
CAGATCACAA AATTGCAATT AGAGAACCAA TTGAGCAATA CCAAACGACA GGCAGATATT
GCAAAGCAAA TGTTCAATTT AGCATTGGGT ATTCCTGTAA GTGCACCTGT TGTATTTAAA
GATGGTCTTG AGCAACTTAC ACTCGAAAAT GTGAGTTTAG AGATTTCTGA GCAAGAACTG
GCTGTAGAGG AAAATGTAGA TTATAAAATT GCAGACAACC TAACCAAGCA AAGAGAGTTA
GAGTTAAAAC TTGAAAAAAG TAAGGCATTA CCAAGCGTAA ATGCATTTGT AAATTACGGT
ACACAAACTC AAGACGACGA TTTTGTATTT TTTGATAGTG ATACCAGATG GTTTCAGTCT
TCAATATTTG GGGTGTCTAT AAATGTCCCA ATCTTTAGCT CTTTAAAACG AAGTGCTAGA
ACACAAAGAG CAGCAATTGC TTTAGATCAG GCTCAAACAG ATTTAGAGCA AACAATTCAG
CAAATTCAGT TAGACACAGA TACAGCTCGT AGTGACTATC AGTTTGCTAT AGAAAGTTAC
CAAACCGCTC AAAAAAATCT TGAGTTGGCA GAGCGAATAG AAAACAAAAA CCAGATAAAA
TTTAGAGAAG GTATTTCTAC AAGCTTTGAT CTACGTCAAG CACAAACACA ACTTTATAAC
GCCCAACAAG AACTCTTGCA AAGTATGGTA AATGTAATTA CTACTAAAGC AGAGTTAGAA
ACGGTACTAA ATACACCACA GCTAAGAGTG CCATATCAAG AAAGCAAGTA A
|
|---|
| Protein sequence | MTYRIVMLLL FVSSVAFSQE APKSYSFSLE EAVNYALDSS YTAINARRDV AKALKQKWET
TADGLPQING SVDYQNQLKQ PVTFIPAEFS GGEPGTFTPV TFGAKQSANL TATLSQVIFD
GSYLVALKAS TAFLEFSENA NEKTRLEVRK GVINAYGGVL LTEESVSIVE KNIDAITDNL
SETQALYEEG FAEEEDAEQL QITKLQLENQ LSNTKRQADI AKQMFNLALG IPVSAPVVFK
DGLEQLTLEN VSLEISEQEL AVEENVDYKI ADNLTKQREL ELKLEKSKAL PSVNAFVNYG
TQTQDDDFVF FDSDTRWFQS SIFGVSINVP IFSSLKRSAR TQRAAIALDQ AQTDLEQTIQ
QIQLDTDTAR SDYQFAIESY QTAQKNLELA ERIENKNQIK FREGISTSFD LRQAQTQLYN
AQQELLQSMV NVITTKAELE TVLNTPQLRV PYQESK
|
|---|
| |