| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_01565 |
|---|
| Symbol | |
|---|
| ID | 9295797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 395498 |
|---|
| End bp | 398122 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | putative TonB-dependent receptor |
|---|
| Protein accession | YP_003715079 |
|---|
| Protein GI | 298206900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0773704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC TAATTTTTAC ACTGGGCTGT TTATTTATAA CAGCCTTTAC ATTTGCTCAA
AGTTCTGTGT CGGGAACAAT TACAGACTCT AACGGCGGCC CTTTACCAGG TGTCAATATT
ATTGAAAAAG GCACTTCTAA TGGTACATCC ACAGATTTTG ATGGAAATTA CACGCTTACA
GTACCAAATG ATGCTGTCCT TGTAATAAGC TTTGTAGGCT TTGAAACTCA AGAAATTTCA
GTAAACTCAC AAACAACAAT TAATGTAACA CTTCAAGAAG GTAATACCTT AGACTCTGTC
CAGCTTGTAG GATCACGTAG CCCTAAAAGA ACAGCAACAG ATACACCAGT GGCAATCGAT
GTTATTGAAG TTTCAGACAT AGTAACTCAA GCTGGTAAAA TTGAAATTAA TGAGCTTCTT
CAATACGCAG CGCCTTCATT TAATGCCAAC AAGCAATCTG GTTCAGACGG TGCAGATCAT
ATAGATCCTG CTACATTAAG AGGTCTTGGC CCAGATCAAA CGCTAGTATT AGTAAACGGG
AAACGTAGGC ACCAATCTTC TTTAATAAAC ATTTTTGGAA CTAGAGGTCG TGGTAATACA
GGAACAGATT TAAATACCAT TCCAGCAGCT TCAATTAAAC GAATAGAAAT TTTACGAGAT
GGTGCAGCAG CACAATACGG GTCAGATGCA ATTGCAGGTG TTATAAACAT TGTATTAAAA
GATAATGTAG ATGAATTTTC TGGAAGTGTA AGCTATGGTG CATATAACAC AAATGCAAAA
GGAGATTTTC CAGACGGCAC TCCAAACACA GACGGCAATA GGCTAGATAC AGATAGAGAT
GGAAATGCTA TTGGAGACGA TCAAAGCTTA GATGGTGGTT CTCTAAAAGT GTCAGGTAAT
TATGGTGTTG CAATTGGAGA GGAAGGTTAT GCAAACTTTA CAACAGAATA TGTAAATAAA
AATAAGACCC TACGACCAGG TTATGACTTT AGAAGAGGTT TTGGTGAAGC TGCGATTGAA
GGATTTAATA TATTCGGAAA CTTGAGTTTC CCAGTGTCAG ACCAAACCGA AGTTTATGCC
TTTGGTGGTC GAAATTATAG AGATACAGAT GCCTATGCAT TTACAAGAAA TGGAGGAGAA
CGTGTTGTTA CAGAAATATA TCCAAATGGT TTTACGCCAA GAATAACATC TATAATTACA
GATAATTCTT TTGCAGCAGG TGTACGATCT GAGTTAGGAA ACGATTGGAA AGTAGATTTA
AGTAATACTT ACGGAAAAAA TGTCTTTCAT TATTACATAA AAGGAACCCT AAATGCATCT
TTAGAAGAAA ACTCTCCTAC AGAGTTTGAT GCTGGTGGTC ATTCTTTATC ACAAAACACA
ATAAACTTAG ACTTTTCAAA ATATTACGCA GACATAGCTA ATGGTTTTAA CTTAGCAATT
GGTACAGAGT ACAGAACAGA AACATTTACA ATTTTTGCTG GAGAAACAGG TTCTTATGCA
ACCTACGACA CCAATGGGCA ACCCATAACA GATCCTCAAA CACAACAACA ACCTATAGAT
CCAGGAACTG GTAACCCAAG ACCTGGTGGC TCACAAGGTT TTCCAGGCTA TAGCCCGGAA
AACGTAGTAG ATAGAAGTAG GTCTAACGTT TCTCTGTATG TTGATACAGA ATTAGACGTT
ACAGAAAAGT TTCTTTTAGC CGGCGCAGTT AGATTTGAAA ACTACAGTGA TTTCGGAAGC
ACATTTAATG GTAAATTGGC TTCAAGATAT AAGCTTACAG ATAATATAAA TTTAAGAGGA
TCTTTAAGCT CAGGCTTTAG GGCGCCATCT TTAGCACAAG TATATTACAA CTTGCGCTTT
ACAGATTTTC AAGGTGGAAC CGCAACAGAG TCACTACTAT CTGCAAATAA TAGTCCTGTA
ACCAGATCAT TTGGTATTGG AGAGTTAAAA GAAGAAACAG CTACAAATGC ATCTTTAGGG
TTTACAGCTA AAGCTGGAGA TTTTACAGCT ACTATAGATG GTTATTTTGT GAGTGTTAAA
GACCGTATAG TACTAACTGG TACTTTTGAT GCTCCACAAA TAGACAACGT TAATGAAGCT
CAGTTTTTTG TAAATGGCGT AGATACAGAA ACTACAGGTG TAGATATTAT ACTTTCTTAC
AGGAAACTTT TAGATGACAG CTCAATTTCT GCCACTTTAC TAGGTAATAT AAACAGTATT
GAAATTAAGG ATGTAAATAA TGGCAACTTA GATGAAGATA CATTTTTCGG TGCGAGAGAG
CGAGCATTCT TATTAGCTTC TGCACCAGAT AGCAAGTTTG CTTTAAACAT GTCTTATGTA
AAAAATAAGT TTAATACAGC ATTAGGGATT ACAAGATATT CAGAAATAAC TTTAATCGAT
TTTGCAGAAA CAGAAGATGT ATATGATGCA AAATTTACTG TTGACTTAAA CTTTGGGTAT
GAAATTACAG ACCAAGTTAA GCTTAGTATA GGTAGTAATA ACTTATTTAA TGAATATCCA
GACCAGCAAA ATGATGGCGA AACCGAAGGT GGTGGTTATT GGGATTCAGT TCAAATGGGA
TTTGGCGGTG CATACTACTA TACACGTCTA GATTTCACAT TCTAA
|
|---|
| Protein sequence | MKTLIFTLGC LFITAFTFAQ SSVSGTITDS NGGPLPGVNI IEKGTSNGTS TDFDGNYTLT
VPNDAVLVIS FVGFETQEIS VNSQTTINVT LQEGNTLDSV QLVGSRSPKR TATDTPVAID
VIEVSDIVTQ AGKIEINELL QYAAPSFNAN KQSGSDGADH IDPATLRGLG PDQTLVLVNG
KRRHQSSLIN IFGTRGRGNT GTDLNTIPAA SIKRIEILRD GAAAQYGSDA IAGVINIVLK
DNVDEFSGSV SYGAYNTNAK GDFPDGTPNT DGNRLDTDRD GNAIGDDQSL DGGSLKVSGN
YGVAIGEEGY ANFTTEYVNK NKTLRPGYDF RRGFGEAAIE GFNIFGNLSF PVSDQTEVYA
FGGRNYRDTD AYAFTRNGGE RVVTEIYPNG FTPRITSIIT DNSFAAGVRS ELGNDWKVDL
SNTYGKNVFH YYIKGTLNAS LEENSPTEFD AGGHSLSQNT INLDFSKYYA DIANGFNLAI
GTEYRTETFT IFAGETGSYA TYDTNGQPIT DPQTQQQPID PGTGNPRPGG SQGFPGYSPE
NVVDRSRSNV SLYVDTELDV TEKFLLAGAV RFENYSDFGS TFNGKLASRY KLTDNINLRG
SLSSGFRAPS LAQVYYNLRF TDFQGGTATE SLLSANNSPV TRSFGIGELK EETATNASLG
FTAKAGDFTA TIDGYFVSVK DRIVLTGTFD APQIDNVNEA QFFVNGVDTE TTGVDIILSY
RKLLDDSSIS ATLLGNINSI EIKDVNNGNL DEDTFFGARE RAFLLASAPD SKFALNMSYV
KNKFNTALGI TRYSEITLID FAETEDVYDA KFTVDLNFGY EITDQVKLSI GSNNLFNEYP
DQQNDGETEG GGYWDSVQMG FGGAYYYTRL DFTF
|
|---|
| |