| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_01280 |
|---|
| Symbol | |
|---|
| ID | 9295739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 314395 |
|---|
| End bp | 316221 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | Cytochrome-c oxidase |
|---|
| Protein accession | YP_003715022 |
|---|
| Protein GI | 298206843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAG TAGCAGTAGC ACACGATGAT CACTCACATG ACGATCACGG GCATCATCAC
AAAGAAACAT TTATAACCAA GTACATCTTT AGTCAAGATC ATAAGATGAT TGCTAAGCAA
TATCTTATTA CAGGTCTTAT TATGGGTGCT ATAGGAATAG GTATGTCAAT CCTATTCCGT
TTACAGTTAG CTTGGCCAGA AGAATCATTC TGGGTTTTCG AATTCTTTTT AGGAAAATGG
GCAGAAGGTG GTGTTATGGA TCCTGGTGTT TATTTAGCAT TAGTAACTAT TCACGGTACC
ATAATGGTAT TCTTTGTATT AACTGCTGGT TTAAGTGGTA CATTCTCAAA CCTATTAATT
CCACTTCAAA TTGGAGCACG AGACATGGCT TCAGGATTCC TTAATATGGT TTCTTATTGG
TTATTCTTTA TTTCAAGTGT AATCATGTTA TGTTCTCTTT TTGTTGAATC TGGACCTGCA
TCTGCTGGTT GGACAATTTA TCCTCCATTA AGTGCATTAC CTCAGGCAAT TCCAGGTTCT
GGTACAGGTA TGACATTATG GTTAAGCTCT ATGGCGGTAT TTATTGCGTC GTCTTTATTA
GGTTCTCTAA ATTATATTGT AACTGTAATA AACTTACGTA CTAAAGGTAT GTCTATGACA
CGCCTTCCTT TAACTATATG GGCATTTTTT GTAACAGCAA TTATTGGTGT AGTTTCTTTC
CCAGTATTAC TTTCTGCTGC ATTAATGTTA ATTATGGATA GAAGCTTTGG GACATCTTTC
TTCTTAAGTG ATATTTATAT TGCAGGTGAA GTTTTACAAC ACCAAGGAGG ATCTCCAGTT
TTATTTGAAC ACTTATTTTG GTTCTTAGGT CACCCAGAAG TATATATAGT TCTACTTCCT
GCTTTAGGAA TCACTTCAGA AATTATTGCA ACAAATTCTC GTAAACCTAT TTTTGGTTAT
AGAGCTATGG TTGCTTCTAT ATTAGCAATT GCTTTCTTGT CTACAATTGT ATGGGGTCAC
CATATGTTTA TTTCAGGAAT GAATCCGTTC TTAGGTTCTG TATTTACATT TACTACATTA
TTAATTGCAA TACCATCTGC AGTAAAATCT TTCAACTATA TTACAACTCT TTGGAAAGGT
AACTTACAGA TGAATCCTGG TATGTTATTC TCAATAGGTT TAGTATCTAC TTTCATTTCA
GGTGGTTTAA CAGGTATCAT CTTAGGAGAC AGTACTCTAG ATATTAACGT TCACGATACT
TATTTTGTAG TAGCTCACTT TCACTTAGTA ATGGGTATTT CTGCTTTGTA TGGTTTATTT
GCTGGTGTTT ACCATTGGTT CCCAAAAATG TTCCAAGGTC GTATGATGAA CAAGAATCTT
GGTTACGTTC ACTTTTGGGT AACAGCTATA GGAGCTTATG GAATTTTCTT CCCTATGCAC
TTCATAGGTA TGGCAGGTTT ACCAAGACGT TACTATACTA ACACAGCATT CCCTTATTTT
GATGATTTAA CAGATGTAAA TGTTGCTATT ACTATTTTTG CAATTATTAC TGCTTCAGTA
CAGTTAGTAT TCATTTACAA CTTTGTACAC TCAATTTTCT ACGGAAAAGT TGGTTCTCAA
AACCCTTGGA AATCTAATAC TCTTGAGTGG ACAGCAGATC AGAAACATGT TCACGGAAAC
TGGTCTGGTC AAATACCACA CGTTTACCGT TGGCCTTATG ACTACTCTAA GTTAAATGAA
GATGAAACAG ACTATGTTAT TCCAGGTCAA GATTGGGTAG GACAACATAT TCCTATGCAA
GAAAACGAAG AGGAAATGAA TCATTAA
|
|---|
| Protein sequence | MSAVAVAHDD HSHDDHGHHH KETFITKYIF SQDHKMIAKQ YLITGLIMGA IGIGMSILFR
LQLAWPEESF WVFEFFLGKW AEGGVMDPGV YLALVTIHGT IMVFFVLTAG LSGTFSNLLI
PLQIGARDMA SGFLNMVSYW LFFISSVIML CSLFVESGPA SAGWTIYPPL SALPQAIPGS
GTGMTLWLSS MAVFIASSLL GSLNYIVTVI NLRTKGMSMT RLPLTIWAFF VTAIIGVVSF
PVLLSAALML IMDRSFGTSF FLSDIYIAGE VLQHQGGSPV LFEHLFWFLG HPEVYIVLLP
ALGITSEIIA TNSRKPIFGY RAMVASILAI AFLSTIVWGH HMFISGMNPF LGSVFTFTTL
LIAIPSAVKS FNYITTLWKG NLQMNPGMLF SIGLVSTFIS GGLTGIILGD STLDINVHDT
YFVVAHFHLV MGISALYGLF AGVYHWFPKM FQGRMMNKNL GYVHFWVTAI GAYGIFFPMH
FIGMAGLPRR YYTNTAFPYF DDLTDVNVAI TIFAIITASV QLVFIYNFVH SIFYGKVGSQ
NPWKSNTLEW TADQKHVHGN WSGQIPHVYR WPYDYSKLNE DETDYVIPGQ DWVGQHIPMQ
ENEEEMNH
|
|---|
| |