Gene CA2559_01220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_01220 
Symbol 
ID9295727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp300776 
End bp303076 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content37% 
IMG OID 
ProductNADP-dependent malate dehydrogenase 
Protein accessionYP_003715010 
Protein GI298206831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG AAAGCAAACG AAGAGAAGCC TTAGTATATC ACGCCAAACC AACACCTGGT 
AAGATAAAGG TTGTCCCTAC AAAAAAATAT TCATCTCAAC GAGACCTTGC CTTGGCATAT
TCGCCTGGAG TTGCAGAGCC TTGTTTAGAG ATAGAAAAAG ATAAGGAAAA CGTATACAGA
TATACCACCA AAGGTAATCT TGTAGCTGTA ATTTCTAATG GTACAGCAGT ACTTGGTTTA
GGTGATATAG GTCCAGAAGC TTCTAAACCA GTAATGGAAG GTAAAGGGCT ATTGTTTAAA
ATTTTTGCAG ACATAGATGT TTTTGACATA GAGGTAGACA CTAAAGATGT CGATGCTTTT
GTTGAAACAG TAAAGAATAT AGCGCCAACA TTTGGTGGTA TTAATCTAGA AGACATAAAA
GCACCAGAGG CTTTTGAGAT AGAACGAAGA CTTAAGGAAG AGCTGGATAT TCCTGTGATG
CATGACGATC AACACGGTAC AGCAATTATA TCTGCAGCAG CTCTAATTAA TGCACTAGAG
TTAGCAGACA AGAAGATTGA AGATGTAAAG TTTGTGGTAT CAGGTGCTGG ATCAGCTGCA
ATTGCATGCC TTAATTTATA CTTGTTATTA GGGGCAAAAC CAGAAAACAT GTCTGTATTT
GACTCTAATG GATTACTCCA CTCTGAAAGA GGCGATATAA CAATACAGCA AGAAAAATTC
TGTTCTAAAA AAATGTACGG TTCTTTAGCC GAAGCATTTG TTAATGCAGA TGTCTTTTTG
GGGCTTTCAG TAGGAAATAT AGTATCTCCA GAGATGATAA AATCTATGGC TAATGATCCT
ATTGTATTTG CTATGGCTAA TCCAAATCCA GAAATAGATT ATGATCTGGC TATAAGTGCA
CGCAAAGATA TCATTATGGC TACAGGACGT AGTGATCATC CTAATCAGGT TAATAATGTA
TTAGGCTTCC CATTTATATT TCGTGGCGCT TTAGATGTTA GGGCTACTAA AATTAATGAG
GAAATGAAAA TGGCAGCGGT AAAGTCTTTG GCTAAATTAG CTAAGGAGCC AGTTCCGGAG
CAAGTTAATA TAGCCTACGG AGAAACGCGT CTAAACTTTG GGAGAGATTA TATAATACCA
AAACCATTTG ACCCAAGACT TATTGCACAA GTTCCGCCAG CAGTAGCAAA AGCAGCTATT
AAAAGTGGAG TAGCCAGAAA AGAAATTTTA GATTGGCAGA AATATGAAGA CGAACTTTAT
GATCGTATGG GTAACGATAA TAAGGTTACA AGGTTGCTTC ATAACCGTGC TAAAATGAAT
CCTAAACGCA TTGTTTTTGC AGAAGCAGAT CATCTAGATG TACTTAAGGC TGCACAGATT
GTTCATGATG AAGGAATGGG TATTCCTATT CTTCTGGGAC GCCGAGAAGT TATTAAGGAA
TTAATGATCG AGTTAGATTT TGATTCTGAA GAGGTTACCA TTATAGACCC AAAGTCAGAT
GAAGAGAAAG GTCACCTAGA AAATTATGCC AACCAATTCT GGAAGGCTAG ACAAAGAAAA
GGGGTTACAC TCTACGACGC TCAAAAGCTA TTGAGAGAAC GAAATTATTT TGCTGCCATG
ATGGTTCAGT TAGGAGATGC AGATGCTATG CTTTCTGGAT ACTCTAGAGC GTATCCTACT
GTGGTGAAGC CAATTTTAGA AATAATTGGT AAGCTTAAAG GAGTAACCAA AGTTGCCACG
TGTAACTTAA TGAACACCTC TAAAGGCCCA ATTTTTATTA GTGACACATC AATAAATATA
GATCCTACAG CTAAAGATTT AGCTAAAATA GCTCAAATGA CAAACCATAC TGTAAAAATG
TTTGGGATGG AAGCTATTAT AGCAATGGTT TCATATGCCA ATTTTGGCTC TTCAAAAGAT
GCACACGCTA CCAAAGTTAG AGAAGCTGTT GATTTGCTTC ATAAAGTAGC TCCCGATGTA
ATTGTAGATG GAGAATTGCA AGTAGATTTT GCTCTTAATA GAAAAATGAG AGAGGAAAAG
TTTCCATTCT CTAAATTATC CAATAGGAAA GTAAACACAT TAATTTATCC AACGCTGGAC
TCAGCAAACG GAACCTATAA GTTAATAAAG GAGCTTACTG GTGAAGATTC AATAGGCCCA
ATTATGATGG GGTTAGAAAA ACCTGCACAC GTTATTCAAC TTGGAGCAAG TGTAGAGGAA
ATGGTAAATA TGGCTGCTGT TGCAATTGTT GATGCTCAGG ATAAGCAAAA ACGCCAACAA
ATGAAATTAG AAATCCAATA A
 
Protein sequence
MSKESKRREA LVYHAKPTPG KIKVVPTKKY SSQRDLALAY SPGVAEPCLE IEKDKENVYR 
YTTKGNLVAV ISNGTAVLGL GDIGPEASKP VMEGKGLLFK IFADIDVFDI EVDTKDVDAF
VETVKNIAPT FGGINLEDIK APEAFEIERR LKEELDIPVM HDDQHGTAII SAAALINALE
LADKKIEDVK FVVSGAGSAA IACLNLYLLL GAKPENMSVF DSNGLLHSER GDITIQQEKF
CSKKMYGSLA EAFVNADVFL GLSVGNIVSP EMIKSMANDP IVFAMANPNP EIDYDLAISA
RKDIIMATGR SDHPNQVNNV LGFPFIFRGA LDVRATKINE EMKMAAVKSL AKLAKEPVPE
QVNIAYGETR LNFGRDYIIP KPFDPRLIAQ VPPAVAKAAI KSGVARKEIL DWQKYEDELY
DRMGNDNKVT RLLHNRAKMN PKRIVFAEAD HLDVLKAAQI VHDEGMGIPI LLGRREVIKE
LMIELDFDSE EVTIIDPKSD EEKGHLENYA NQFWKARQRK GVTLYDAQKL LRERNYFAAM
MVQLGDADAM LSGYSRAYPT VVKPILEIIG KLKGVTKVAT CNLMNTSKGP IFISDTSINI
DPTAKDLAKI AQMTNHTVKM FGMEAIIAMV SYANFGSSKD AHATKVREAV DLLHKVAPDV
IVDGELQVDF ALNRKMREEK FPFSKLSNRK VNTLIYPTLD SANGTYKLIK ELTGEDSIGP
IMMGLEKPAH VIQLGASVEE MVNMAAVAIV DAQDKQKRQQ MKLEIQ