Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_01220 |
Symbol | |
ID | 9295727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 300776 |
End bp | 303076 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | NADP-dependent malate dehydrogenase |
Protein accession | YP_003715010 |
Protein GI | 298206831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.189364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAG AAAGCAAACG AAGAGAAGCC TTAGTATATC ACGCCAAACC AACACCTGGT AAGATAAAGG TTGTCCCTAC AAAAAAATAT TCATCTCAAC GAGACCTTGC CTTGGCATAT TCGCCTGGAG TTGCAGAGCC TTGTTTAGAG ATAGAAAAAG ATAAGGAAAA CGTATACAGA TATACCACCA AAGGTAATCT TGTAGCTGTA ATTTCTAATG GTACAGCAGT ACTTGGTTTA GGTGATATAG GTCCAGAAGC TTCTAAACCA GTAATGGAAG GTAAAGGGCT ATTGTTTAAA ATTTTTGCAG ACATAGATGT TTTTGACATA GAGGTAGACA CTAAAGATGT CGATGCTTTT GTTGAAACAG TAAAGAATAT AGCGCCAACA TTTGGTGGTA TTAATCTAGA AGACATAAAA GCACCAGAGG CTTTTGAGAT AGAACGAAGA CTTAAGGAAG AGCTGGATAT TCCTGTGATG CATGACGATC AACACGGTAC AGCAATTATA TCTGCAGCAG CTCTAATTAA TGCACTAGAG TTAGCAGACA AGAAGATTGA AGATGTAAAG TTTGTGGTAT CAGGTGCTGG ATCAGCTGCA ATTGCATGCC TTAATTTATA CTTGTTATTA GGGGCAAAAC CAGAAAACAT GTCTGTATTT GACTCTAATG GATTACTCCA CTCTGAAAGA GGCGATATAA CAATACAGCA AGAAAAATTC TGTTCTAAAA AAATGTACGG TTCTTTAGCC GAAGCATTTG TTAATGCAGA TGTCTTTTTG GGGCTTTCAG TAGGAAATAT AGTATCTCCA GAGATGATAA AATCTATGGC TAATGATCCT ATTGTATTTG CTATGGCTAA TCCAAATCCA GAAATAGATT ATGATCTGGC TATAAGTGCA CGCAAAGATA TCATTATGGC TACAGGACGT AGTGATCATC CTAATCAGGT TAATAATGTA TTAGGCTTCC CATTTATATT TCGTGGCGCT TTAGATGTTA GGGCTACTAA AATTAATGAG GAAATGAAAA TGGCAGCGGT AAAGTCTTTG GCTAAATTAG CTAAGGAGCC AGTTCCGGAG CAAGTTAATA TAGCCTACGG AGAAACGCGT CTAAACTTTG GGAGAGATTA TATAATACCA AAACCATTTG ACCCAAGACT TATTGCACAA GTTCCGCCAG CAGTAGCAAA AGCAGCTATT AAAAGTGGAG TAGCCAGAAA AGAAATTTTA GATTGGCAGA AATATGAAGA CGAACTTTAT GATCGTATGG GTAACGATAA TAAGGTTACA AGGTTGCTTC ATAACCGTGC TAAAATGAAT CCTAAACGCA TTGTTTTTGC AGAAGCAGAT CATCTAGATG TACTTAAGGC TGCACAGATT GTTCATGATG AAGGAATGGG TATTCCTATT CTTCTGGGAC GCCGAGAAGT TATTAAGGAA TTAATGATCG AGTTAGATTT TGATTCTGAA GAGGTTACCA TTATAGACCC AAAGTCAGAT GAAGAGAAAG GTCACCTAGA AAATTATGCC AACCAATTCT GGAAGGCTAG ACAAAGAAAA GGGGTTACAC TCTACGACGC TCAAAAGCTA TTGAGAGAAC GAAATTATTT TGCTGCCATG ATGGTTCAGT TAGGAGATGC AGATGCTATG CTTTCTGGAT ACTCTAGAGC GTATCCTACT GTGGTGAAGC CAATTTTAGA AATAATTGGT AAGCTTAAAG GAGTAACCAA AGTTGCCACG TGTAACTTAA TGAACACCTC TAAAGGCCCA ATTTTTATTA GTGACACATC AATAAATATA GATCCTACAG CTAAAGATTT AGCTAAAATA GCTCAAATGA CAAACCATAC TGTAAAAATG TTTGGGATGG AAGCTATTAT AGCAATGGTT TCATATGCCA ATTTTGGCTC TTCAAAAGAT GCACACGCTA CCAAAGTTAG AGAAGCTGTT GATTTGCTTC ATAAAGTAGC TCCCGATGTA ATTGTAGATG GAGAATTGCA AGTAGATTTT GCTCTTAATA GAAAAATGAG AGAGGAAAAG TTTCCATTCT CTAAATTATC CAATAGGAAA GTAAACACAT TAATTTATCC AACGCTGGAC TCAGCAAACG GAACCTATAA GTTAATAAAG GAGCTTACTG GTGAAGATTC AATAGGCCCA ATTATGATGG GGTTAGAAAA ACCTGCACAC GTTATTCAAC TTGGAGCAAG TGTAGAGGAA ATGGTAAATA TGGCTGCTGT TGCAATTGTT GATGCTCAGG ATAAGCAAAA ACGCCAACAA ATGAAATTAG AAATCCAATA A
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Protein sequence | MSKESKRREA LVYHAKPTPG KIKVVPTKKY SSQRDLALAY SPGVAEPCLE IEKDKENVYR YTTKGNLVAV ISNGTAVLGL GDIGPEASKP VMEGKGLLFK IFADIDVFDI EVDTKDVDAF VETVKNIAPT FGGINLEDIK APEAFEIERR LKEELDIPVM HDDQHGTAII SAAALINALE LADKKIEDVK FVVSGAGSAA IACLNLYLLL GAKPENMSVF DSNGLLHSER GDITIQQEKF CSKKMYGSLA EAFVNADVFL GLSVGNIVSP EMIKSMANDP IVFAMANPNP EIDYDLAISA RKDIIMATGR SDHPNQVNNV LGFPFIFRGA LDVRATKINE EMKMAAVKSL AKLAKEPVPE QVNIAYGETR LNFGRDYIIP KPFDPRLIAQ VPPAVAKAAI KSGVARKEIL DWQKYEDELY DRMGNDNKVT RLLHNRAKMN PKRIVFAEAD HLDVLKAAQI VHDEGMGIPI LLGRREVIKE LMIELDFDSE EVTIIDPKSD EEKGHLENYA NQFWKARQRK GVTLYDAQKL LRERNYFAAM MVQLGDADAM LSGYSRAYPT VVKPILEIIG KLKGVTKVAT CNLMNTSKGP IFISDTSINI DPTAKDLAKI AQMTNHTVKM FGMEAIIAMV SYANFGSSKD AHATKVREAV DLLHKVAPDV IVDGELQVDF ALNRKMREEK FPFSKLSNRK VNTLIYPTLD SANGTYKLIK ELTGEDSIGP IMMGLEKPAH VIQLGASVEE MVNMAAVAIV DAQDKQKRQQ MKLEIQ
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